Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009662.1-P | Field mustard | cytosol | 83.45 | 100.0 |
| CDY07874 | Canola | cytosol | 99.31 | 99.31 |
| AT5G66110.1 | Thale cress | cytosol | 92.41 | 91.16 |
| VIT_04s0023g03910.t01 | Wine grape | cytosol | 60.0 | 71.9 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 73.1 | 68.39 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 69.66 | 65.16 |
| CDY65011 | Canola | cytosol | 67.59 | 64.05 |
| CDX90282 | Canola | cytosol | 67.59 | 64.05 |
| CDY12089 | Canola | cytosol | 66.9 | 63.4 |
| VIT_04s0023g03890.t01 | Wine grape | cytosol | 69.66 | 63.12 |
| Solyc02g083550.1.1 | Tomato | cytosol | 68.97 | 62.89 |
| CDX72748 | Canola | cytosol | 66.21 | 62.75 |
| Zm00001d004138_P001 | Maize | cytosol | 66.9 | 62.58 |
| TraesCS6B01G059000.1 | Wheat | cytosol | 68.28 | 62.26 |
| TraesCS6A01G043000.1 | Wheat | cytosol | 68.28 | 62.26 |
| TraesCS6D01G049600.1 | Wheat | cytosol | 68.28 | 62.26 |
| Os03t0156600-01 | Rice | cytosol | 65.52 | 61.29 |
| EES11880 | Sorghum | cytosol | 64.83 | 60.65 |
| PGSC0003DMT400009390 | Potato | cytosol | 66.21 | 60.38 |
| TraesCS2D01G063000.1 | Wheat | cytosol, plastid | 64.14 | 60.0 |
| TraesCS2B01G077100.1 | Wheat | cytosol, plastid | 64.14 | 60.0 |
| TraesCS2A01G064900.1 | Wheat | nucleus | 64.14 | 60.0 |
| Os04t0244800-01 | Rice | plasma membrane | 63.45 | 59.35 |
| EER92834 | Sorghum | cytosol | 62.07 | 57.69 |
| Zm00001d027720_P001 | Maize | cytosol | 60.0 | 55.77 |
| CDY52653 | Canola | cytosol | 57.24 | 54.25 |
| Zm00001d034978_P001 | Maize | cytosol | 55.86 | 53.64 |
| HORVU7Hr1G090970.1 | Barley | mitochondrion | 58.62 | 53.46 |
| CDX76309 | Canola | cytosol | 56.55 | 53.25 |
| CDX69108 | Canola | cytosol | 55.86 | 52.94 |
| CDY17504 | Canola | cytosol | 55.86 | 52.6 |
| EES14354 | Sorghum | cytosol | 53.79 | 51.66 |
| TraesCS7A01G382700.1 | Wheat | mitochondrion, plastid | 56.55 | 50.93 |
| TraesCS7B01G285400.1 | Wheat | mitochondrion, plastid | 56.55 | 50.93 |
| CDY16919 | Canola | cytosol | 51.72 | 50.34 |
| CDY38431 | Canola | cytosol | 51.72 | 50.34 |
| Zm00001d052760_P001 | Maize | cytosol | 52.41 | 50.33 |
| TraesCS7D01G379100.1 | Wheat | mitochondrion, plastid | 55.17 | 49.69 |
| TraesCS5A01G244000.1 | Wheat | cytosol | 51.72 | 49.34 |
| TraesCS5D01G250700.1 | Wheat | cytosol | 51.72 | 49.34 |
| TraesCS2D01G285700.1 | Wheat | cytosol | 51.03 | 49.01 |
| TraesCS2B01G304100.1 | Wheat | cytosol | 51.03 | 49.01 |
| TraesCS2A01G287200.1 | Wheat | cytosol | 51.03 | 49.01 |
| Os01t0507700-01 | Rice | plasma membrane | 51.03 | 49.01 |
| HORVU5Hr1G069380.2 | Barley | cytosol | 51.03 | 48.68 |
| CDX72773 | Canola | cytosol | 50.34 | 48.67 |
| CDX96299 | Canola | cytosol | 50.34 | 48.67 |
| TraesCS3D01G209500.1 | Wheat | cytosol | 50.34 | 48.34 |
| TraesCS3A01G206100.1 | Wheat | cytosol | 50.34 | 48.34 |
| HORVU3Hr1G049780.1 | Barley | cytosol | 50.34 | 48.34 |
| CDY55938 | Canola | cytosol | 49.66 | 48.32 |
| CDX85452 | Canola | cytosol | 49.66 | 48.32 |
| TraesCS5B01G242000.1 | Wheat | cytosol | 50.34 | 48.03 |
| CDY21408 | Canola | cytosol | 50.34 | 47.71 |
| CDY04750 | Canola | cytosol | 50.34 | 47.71 |
| CDX75144 | Canola | cytosol | 41.38 | 47.62 |
| CDY12499 | Canola | cytosol | 49.66 | 47.06 |
| CDY25762 | Canola | cytosol | 48.97 | 46.41 |
| KRH28829 | Soybean | cytosol | 37.93 | 45.45 |
| TraesCS3B01G238100.1 | Wheat | cytosol | 30.34 | 44.0 |
| HORVU6Hr1G009000.1 | Barley | cytosol, plastid, vacuole | 67.59 | 43.56 |
| CDX86196 | Canola | cytosol | 46.21 | 42.41 |
| CDY41999 | Canola | cytosol | 46.21 | 42.41 |
| CDY42647 | Canola | cytosol | 46.21 | 42.41 |
| CDY36193 | Canola | cytosol | 42.76 | 41.33 |
| CDY08096 | Canola | cytosol | 33.1 | 34.78 |
| CDY05886 | Canola | cytosol | 33.1 | 34.78 |
| CDY06206 | Canola | cytosol | 32.41 | 31.13 |
| CDX94648 | Canola | cytosol | 28.97 | 29.79 |
| CDY57455 | Canola | cytosol | 28.97 | 29.79 |
| CDX72102 | Canola | cytosol | 32.41 | 29.75 |
| CDY27183 | Canola | cytosol | 32.41 | 29.75 |
| CDX76017 | Canola | cytosol | 31.03 | 28.48 |
| CDY47384 | Canola | cytosol, extracellular | 31.03 | 28.3 |
| HORVU2Hr1G011060.1 | Barley | nucleus, plastid | 25.52 | 23.87 |
| CDX99542 | Canola | plastid | 28.28 | 22.53 |
| CDX86861 | Canola | plastid | 28.28 | 22.53 |
| CDY13354 | Canola | cytosol | 26.21 | 21.35 |
| CDX67533 | Canola | cytosol | 26.21 | 21.35 |
| CDX85985 | Canola | mitochondrion | 17.24 | 20.83 |
| CDY09978 | Canola | cytosol | 33.1 | 16.44 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:A0A078DFI8 | EnsemblPlants:CDX88005 | ProteinID:CDX88005 | ProteinID:CDX88005.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 |
| EnsemblPlantsGene:GSBRNA2T00147406001 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 | PFscan:PS50846 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF14 | SUPFAM:SSF55008 | UniParc:UPI0004EF414C | SEG:seg | : |
Description
BnaA06g25960D
Coordinates
chrLK031854:-:84040..84615
Molecular Weight (calculated)
16441.0 Da
IEP (calculated)
10.128
GRAVY (calculated)
-0.536
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFVDLCYRE RRHRKLKQVE IKVKMDCEGC ERRVRKSVQG MKGVTNVTVD PKQSKLTVEG FVQPNKVVRR VMHRTGKKAE LWPYVPYEVV PHPYAPGAYD
101: KKAPPGYVRN ALADPLVAPL ARASSFEVKY TSAFSDDNPN ACTIM
101: KKAPPGYVRN ALADPLVAPL ARASSFEVKY TSAFSDDNPN ACTIM
001: MGFRDICYRK HHKKLKQFQK VEIKVKMDCE GCERRVRKSV EGMKGVSKVT VDPKQSKLTV EGFVQPSKVV HRVMHRTGKK AELWPYVPYE VVPHPYAPGA
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM
Arabidopsis Description
HIPP27Heavy metal-associated isoprenylated plant protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZW1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.