Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G38580.1 | EES13117 | AT4G27780.1 | 18823312 |
| AT4G38580.1 | KXG37573 | AT4G27780.1 | 18823312 |
| AT5G66110.1 | EES12241 | AT1G54060.1 | 21798944 |
| AT5G66110.1 | KXG30464 | AT1G54060.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027720_P001 | Maize | cytosol | 92.95 | 92.95 |
| Os03t0156600-01 | Rice | cytosol | 76.28 | 76.77 |
| Bra009662.1-P | Field mustard | cytosol | 53.85 | 69.42 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 66.67 | 67.1 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 64.1 | 64.52 |
| EES11880 | Sorghum | cytosol | 64.1 | 64.52 |
| AT5G66110.1 | Thale cress | cytosol | 59.62 | 63.27 |
| CDX88005 | Canola | cytosol | 57.69 | 62.07 |
| CDY07874 | Canola | cytosol | 57.69 | 62.07 |
| KRH60697 | Soybean | cytosol | 60.9 | 61.69 |
| VIT_04s0023g03910.t01 | Wine grape | cytosol | 47.44 | 61.16 |
| KRH29001 | Soybean | cytosol | 58.97 | 58.97 |
| Bra010738.1-P | Field mustard | cytosol | 57.69 | 58.82 |
| CDX90282 | Canola | cytosol | 57.69 | 58.82 |
| CDY12089 | Canola | cytosol | 57.69 | 58.82 |
| AT4G38580.1 | Thale cress | cytosol | 57.05 | 58.17 |
| CDY65011 | Canola | cytosol | 56.41 | 57.52 |
| Bra033570.1-P | Field mustard | cytosol | 56.41 | 57.52 |
| Solyc01g111600.2.1 | Tomato | nucleus | 55.77 | 56.86 |
| PGSC0003DMT400015784 | Potato | cytosol | 55.77 | 56.86 |
| CDX72748 | Canola | cytosol | 55.77 | 56.86 |
| VIT_03s0038g02440.t01 | Wine grape | cytosol | 56.41 | 56.77 |
| PGSC0003DMT400009390 | Potato | cytosol | 55.13 | 54.09 |
| KRH24318 | Soybean | cytosol, nucleus, plastid | 29.49 | 53.49 |
| Solyc02g083550.1.1 | Tomato | cytosol | 53.85 | 52.83 |
| VIT_04s0023g03890.t01 | Wine grape | cytosol | 53.85 | 52.5 |
| CDX69108 | Canola | cytosol | 51.28 | 52.29 |
| Bra011581.1-P | Field mustard | cytosol | 51.28 | 52.29 |
| CDY52653 | Canola | cytosol | 51.28 | 52.29 |
| AT4G35060.1 | Thale cress | cytosol | 50.0 | 50.98 |
| EER96651 | Sorghum | cytosol | 52.56 | 50.93 |
| CDX76309 | Canola | cytosol | 48.72 | 49.35 |
| Bra034669.1-P | Field mustard | cytosol | 48.72 | 49.35 |
| CDY17504 | Canola | cytosol | 48.72 | 49.35 |
| EES13808 | Sorghum | cytosol | 44.23 | 47.59 |
| EES14354 | Sorghum | cytosol | 45.51 | 47.02 |
| KRH28829 | Soybean | cytosol | 33.97 | 43.8 |
| EER99736 | Sorghum | cytosol | 46.15 | 42.86 |
| KXG30743 | Sorghum | plastid | 37.18 | 32.77 |
| EES03638 | Sorghum | cytosol | 31.41 | 30.43 |
| OQU85626 | Sorghum | mitochondrion | 30.13 | 28.48 |
| EER92967 | Sorghum | plastid | 33.33 | 26.8 |
| KXG39011 | Sorghum | cytosol | 28.21 | 21.15 |
| EER89887 | Sorghum | cytosol | 25.0 | 19.31 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | UniProt:C5WXT6 | EnsemblPlants:EER92834 | ProteinID:EER92834 | ProteinID:EER92834.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0030001 | GO:GO:0046872 |
| GO:GO:0046914 | GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 |
| PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF168 | EnsemblPlantsGene:SORBI_3001G499400 | SUPFAM:SSF55008 | UniParc:UPI0001A82B3D |
| RefSeq:XP_002465836.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:76881812..76882762
Molecular Weight (calculated)
17564.1 Da
IEP (calculated)
7.907
GRAVY (calculated)
-0.503
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRVDDLIAE LCLLPAKVLG KKKRREFQTV ELLVRMDCEG CERRVRKAVE DMRGVSSVEV DPKQNKVSVS GYVEAPEVVE RLRRRAGKEA KPWPYVPYEV
101: VPHPYAPGAY DKKAPPGYVR NVLDDPDAAP LVRAASMEER YTTAFSDDNP NSCAVM
101: VPHPYAPGAY DKKAPPGYVR NVLDDPDAAP LVRAASMEER YTTAFSDDNP NSCAVM
001: MGFRDICYRK HHKKLKQFQK VEIKVKMDCE GCERRVRKSV EGMKGVSKVT VDPKQSKLTV EGFVQPSKVV HRVMHRTGKK AELWPYVPYE VVPHPYAPGA
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM
Arabidopsis Description
HIPP27Heavy metal-associated isoprenylated plant protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZW1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.