CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018075_P001	Maize	mitochondrion	83.62	80.0
TraesCS6D01G282300.1	Wheat	cytosol, mitochondrion	57.63	63.35
TraesCS6B01G332000.2	Wheat	cytosol	57.63	62.96
EES13808	Sorghum	cytosol	35.59	43.45
EER96651	Sorghum	cytosol	37.85	41.61
EES14354	Sorghum	cytosol	34.46	40.4
EES11880	Sorghum	cytosol	35.03	40.0
EER99736	Sorghum	cytosol	36.72	38.69
EER92834	Sorghum	cytosol	32.77	37.18
OQU85626	Sorghum	mitochondrion	28.25	30.3
EER92967	Sorghum	plastid	31.64	28.87
KXG39011	Sorghum	cytosol	29.94	25.48
EES03638	Sorghum	cytosol	23.16	25.47
EER89887	Sorghum	cytosol	23.73	20.79

Protein Annotations

EnsemblPlants:KXG30743	EnsemblPlantsGene:SORBI_3004G234400	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PANTHER:PTHR22814	PANTHER:PTHR22814:SF145	PFAM:PF00403	PFscan:PS50846	ProteinID:KXG30743	ProteinID:KXG30743.1
SEG:seg	SUPFAM:SSF55008	UniParc:UPI0003C6C94E	UniProt:A0A194YR86	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr4:-:58270417..58272510

Molecular Weight (calculated)

19511.4 Da

IEP (calculated)

10.316

GRAVY (calculated)

-0.508

Length

177 amino acids

Sequence
(BLAST)

001: MGGAMRQLLS FLRAINGRPR EKKRKTTTTT LRRRRLVQTV VELRVRMDCE RCEREVKKAL SGIRGVQHVE VNRLQQKVTV TGEVDPAAVL RRAQSTGKKA
101: EPWPGPGPQS TAGYYGPSAA ALYGFGAAQL QAHDGRWANP AGYYYPYYPA PVMEAAIGAE QITSLFSDDN PNACSVM

Best Arabidopsis Sequence Match ( AT1G06330.1 )
(BLAST)

001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.