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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 5
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d051472_P001 Maize mitochondrion 86.06 94.67
TraesCS6D01G240700.1 Wheat mitochondrion 73.94 81.33
TraesCS6A01G259700.1 Wheat mitochondrion 66.67 76.92
TraesCS6B01G287000.1 Wheat mitochondrion 70.3 76.32
GSMUA_Achr2P10210_001 Banana cytosol 54.55 60.81
VIT_08s0040g00130.t01 Wine grape cytosol 44.24 58.4
KRH57823 Soybean cytosol 46.67 52.03
HORVU6Hr1G066220.1 Barley cytosol 57.58 51.35
Bra014664.1-P Field mustard cytosol 40.61 49.63
CDX72102 Canola cytosol 47.27 49.37
CDY27183 Canola cytosol 47.27 49.37
Bra007280.1-P Field mustard cytosol 46.67 48.73
CDY47384 Canola cytosol, extracellular 46.06 47.8
CDX76017 Canola cytosol 44.85 46.84
AT3G56891.1 Thale cress cytosol 44.85 44.58
EES03638 Sorghum cytosol 36.97 37.89
EER92967 Sorghum plastid 39.39 33.51
EES13808 Sorghum cytosol 29.09 33.1
EES11880 Sorghum cytosol 28.48 30.32
EER92834 Sorghum cytosol 28.48 30.13
EER99736 Sorghum cytosol 30.3 29.76
EER96651 Sorghum cytosol 28.48 29.19
EES14354 Sorghum cytosol 26.67 29.14
KXG30743 Sorghum plastid 30.3 28.25
EER89887 Sorghum cytosol 33.94 27.72
KXG39011 Sorghum cytosol 32.12 25.48
Protein Annotations
EnsemblPlants:OQU85626EnsemblPlantsGene:SORBI_3004G280301Gene3D:3.30.70.100GO:GO:0003674GO:GO:0005488GO:GO:0006810
GO:GO:0008150GO:GO:0030001GO:GO:0046872InterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121
PANTHER:PTHR22814PANTHER:PTHR22814:SF85PFAM:PF00403PFscan:PS50846ProteinID:OQU85626ProteinID:OQU85626.1
SUPFAM:SSF55008UniParc:UPI000B424DEEUniProt:A0A1Z5RQF7MapMan:35.1::
Description
hypothetical protein
Coordinates
chr4:-:62258710..62260788
Molecular Weight (calculated)
19174.7 Da
IEP (calculated)
7.110
GRAVY (calculated)
-0.539
Length
165 amino acids
Sequence
(BLAST)
001: MLRFWRTQRS TTSSNALSVS EPIPDRTSMR KTTVVEMNVH MDCDGCEKRV RKAMSRLQGV SSVEIDMDRQ KVTVTGYVDR REVLRAARRT GRAAEFWPWP
101: YDGEYYPFAI QYLEDNTYMA TDRYYRHGYN DPMIGSYPCH AFTHVIDDDA LAVFHVDNVH ACAVM
Best Arabidopsis Sequence Match ( AT3G56891.1 )
(BLAST)
001: MFDWIHGNSR LPIALSIVEL LVDMDCKGCE KKVRRAISKL DGVDTVEIDV DRQKVTVTGY VDREEVLKMV KRTGRTAEYW PFPYNGYYGD YYTYPSQHLE
101: QSDQKIYQTI SYSGKYDFYD VDDFQNTNNS TINGYYPSSS QKVQPNIDEN ALHLFSDDNA HACTIM
Arabidopsis Description
HIPP45Heavy metal-associated isoprenylated plant protein 45 [Source:UniProtKB/Swiss-Prot;Acc:B3H6D0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.