Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76017 | Canola | cytosol | 90.57 | 91.14 |
| CDX72102 | Canola | cytosol | 84.91 | 85.44 |
| CDY27183 | Canola | cytosol | 81.76 | 82.28 |
| AT3G56891.1 | Thale cress | cytosol | 75.47 | 72.29 |
| VIT_08s0040g00130.t01 | Wine grape | cytosol | 44.65 | 56.8 |
| KRH57823 | Soybean | cytosol | 50.94 | 54.73 |
| GSMUA_Achr2P10210_001 | Banana | cytosol | 49.06 | 52.7 |
| Zm00001d051472_P001 | Maize | mitochondrion | 47.8 | 50.67 |
| TraesCS6D01G240700.1 | Wheat | mitochondrion | 46.54 | 49.33 |
| TraesCS6A01G259700.1 | Wheat | mitochondrion | 43.4 | 48.25 |
| OQU85626 | Sorghum | mitochondrion | 47.8 | 46.06 |
| TraesCS6B01G287000.1 | Wheat | mitochondrion | 44.03 | 46.05 |
| CDY06206 | Canola | cytosol | 34.59 | 36.42 |
| HORVU6Hr1G066220.1 | Barley | cytosol | 41.51 | 35.68 |
| CDX94648 | Canola | cytosol | 30.82 | 34.75 |
| CDY57455 | Canola | cytosol | 30.82 | 34.75 |
| CDX96299 | Canola | cytosol | 32.7 | 34.67 |
| CDX72773 | Canola | cytosol | 32.7 | 34.67 |
| CDY16919 | Canola | cytosol | 32.08 | 34.23 |
| CDY38431 | Canola | cytosol | 32.08 | 34.23 |
| CDX86196 | Canola | cytosol | 32.7 | 32.91 |
| CDY42647 | Canola | cytosol | 32.7 | 32.91 |
| CDY41999 | Canola | cytosol | 32.7 | 32.91 |
| CDX85452 | Canola | cytosol | 30.82 | 32.89 |
| CDY55938 | Canola | cytosol | 30.82 | 32.89 |
| CDY05886 | Canola | cytosol | 28.3 | 32.61 |
| CDY08096 | Canola | cytosol | 28.3 | 32.61 |
| CDY12499 | Canola | cytosol | 30.82 | 32.03 |
| CDY25762 | Canola | cytosol | 30.82 | 32.03 |
| CDX75144 | Canola | cytosol | 25.16 | 31.75 |
| CDX67533 | Canola | cytosol | 35.22 | 31.46 |
| CDY13354 | Canola | cytosol | 35.22 | 31.46 |
| CDY21408 | Canola | cytosol | 30.19 | 31.37 |
| CDX72748 | Canola | cytosol | 30.19 | 31.37 |
| CDY12089 | Canola | cytosol | 30.19 | 31.37 |
| CDY65011 | Canola | cytosol | 30.19 | 31.37 |
| CDY04750 | Canola | cytosol | 30.19 | 31.37 |
| CDX90282 | Canola | cytosol | 30.19 | 31.37 |
| CDX88005 | Canola | cytosol | 28.3 | 31.03 |
| CDY07874 | Canola | cytosol | 28.3 | 31.03 |
| CDX86861 | Canola | plastid | 35.22 | 30.77 |
| CDX99542 | Canola | plastid | 35.22 | 30.77 |
| CDX69108 | Canola | cytosol | 29.56 | 30.72 |
| CDY52653 | Canola | cytosol | 29.56 | 30.72 |
| CDX85985 | Canola | mitochondrion | 22.64 | 30.0 |
| CDX76309 | Canola | cytosol | 28.93 | 29.87 |
| CDY17504 | Canola | cytosol | 28.93 | 29.87 |
| CDY36193 | Canola | cytosol | 27.04 | 28.67 |
| CDY09978 | Canola | cytosol | 36.48 | 19.86 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:A0A078IDD8 | UniProt:A0A078IDD8 | EnsemblPlants:CDY47384 | ProteinID:CDY47384 |
| ProteinID:CDY47384.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 |
| GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00087283001 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:Heavy-metal-associated_CS | InterPro:IPR006121 |
| PFAM:PF00403 | ScanProsite:PS01047 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF85 | SUPFAM:SSF55008 |
| SignalP:SignalP-noTM | UniParc:UPI0004EF3DD8 | SEG:seg | : | : | : |
Description
BnaC04g24790DBnaC04g24790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDD8]
Coordinates
chrLK032713:-:109146..109807
Molecular Weight (calculated)
18357.3 Da
IEP (calculated)
4.493
GRAVY (calculated)
-0.604
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDWMHGNFR LSLALSVVEL LVDMDCQGCE TKVRRAISKL DGVDTVEIDV DQQKVTVTGY IDREEVLRIV KRTGRGAEFW PFPYDGYYGD YYTYPSHQYL
101: EQSNQKINNH GENSISYGGN YNFYEDSSIN GYYPRSPQKV DENDIHLFSD DNVHACAVM
101: EQSNQKINNH GENSISYGGN YNFYEDSSIN GYYPRSPQKV DENDIHLFSD DNVHACAVM
001: MFDWIHGNSR LPIALSIVEL LVDMDCKGCE KKVRRAISKL DGVDTVEIDV DRQKVTVTGY VDREEVLKMV KRTGRTAEYW PFPYNGYYGD YYTYPSQHLE
101: QSDQKIYQTI SYSGKYDFYD VDDFQNTNNS TINGYYPSSS QKVQPNIDEN ALHLFSDDNA HACTIM
101: QSDQKIYQTI SYSGKYDFYD VDDFQNTNNS TINGYYPSSS QKVQPNIDEN ALHLFSDDNA HACTIM
Arabidopsis Description
HIPP45Heavy metal-associated isoprenylated plant protein 45 [Source:UniProtKB/Swiss-Prot;Acc:B3H6D0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.