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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034669.1-P Field mustard cytosol 100.0 100.0
CDY17504 Canola cytosol 98.7 98.7
CDY52653 Canola cytosol 94.16 94.77
AT4G35060.1 Thale cress cytosol 94.16 94.77
CDX69108 Canola cytosol 92.86 93.46
KRH60697 Soybean cytosol 74.68 74.68
CDX90282 Canola cytosol 72.08 72.55
CDY12089 Canola cytosol 71.43 71.9
CDY65011 Canola cytosol 70.78 71.24
VIT_03s0038g02440.t01 Wine grape cytosol 71.43 70.97
CDX72748 Canola cytosol 70.13 70.59
PGSC0003DMT400015784 Potato cytosol 68.18 68.63
Solyc01g111600.2.1 Tomato nucleus 67.53 67.97
KRH29001 Soybean cytosol 67.53 66.67
GSMUA_Achr4P25770_001 Banana cytosol, plastid 62.34 61.94
TraesCS2B01G077100.1 Wheat cytosol, plastid 59.74 59.35
TraesCS2D01G063000.1 Wheat cytosol, plastid 59.74 59.35
GSMUA_Achr1P02370_001 Banana cytosol, plastid 59.74 59.35
KRH24318 Soybean cytosol, nucleus, plastid 32.47 58.14
TraesCS2A01G064900.1 Wheat nucleus 58.44 58.06
EES11880 Sorghum cytosol 57.79 57.42
Os04t0244800-01 Rice plasma membrane 57.14 56.77
CDY07874 Canola cytosol 53.25 56.55
CDX88005 Canola cytosol 53.25 56.55
Zm00001d004138_P001 Maize cytosol 56.49 56.13
Os03t0156600-01 Rice cytosol 52.6 52.26
Zm00001d027720_P001 Maize cytosol 50.65 50.0
TraesCS6A01G043000.1 Wheat cytosol 51.3 49.69
TraesCS6B01G059000.1 Wheat cytosol 51.3 49.69
TraesCS7B01G285400.1 Wheat mitochondrion, plastid 51.3 49.07
HORVU7Hr1G090970.1 Barley mitochondrion 50.65 49.06
TraesCS6D01G049600.1 Wheat cytosol 50.65 49.06
EER92834 Sorghum cytosol 49.35 48.72
TraesCS7A01G382700.1 Wheat mitochondrion, plastid 50.65 48.45
CDX72773 Canola cytosol 46.75 48.0
CDX96299 Canola cytosol 46.75 48.0
TraesCS7D01G379100.1 Wheat mitochondrion, plastid 50.0 47.83
CDY12499 Canola cytosol 47.4 47.71
CDX75144 Canola cytosol 38.96 47.62
CDY25762 Canola cytosol 46.75 47.06
CDY21408 Canola cytosol 46.1 46.41
CDY04750 Canola cytosol 45.45 45.75
Zm00001d034978_P001 Maize cytosol 44.16 45.03
Os01t0507700-01 Rice plasma membrane 42.86 43.71
TraesCS5D01G250700.1 Wheat cytosol 42.86 43.42
HORVU5Hr1G069380.2 Barley cytosol 42.86 43.42
TraesCS5A01G244000.1 Wheat cytosol 42.86 43.42
TraesCS2D01G285700.1 Wheat cytosol 42.21 43.05
TraesCS2B01G304100.1 Wheat cytosol 42.21 43.05
TraesCS2A01G287200.1 Wheat cytosol 42.21 43.05
TraesCS5B01G242000.1 Wheat cytosol 42.21 42.76
CDY36193 Canola cytosol 41.56 42.67
EES14354 Sorghum cytosol 41.56 42.38
Zm00001d052760_P001 Maize cytosol 40.26 41.06
CDX86196 Canola cytosol 41.56 40.51
CDY41999 Canola cytosol 41.56 40.51
CDY42647 Canola cytosol 41.56 40.51
TraesCS3A01G206100.1 Wheat cytosol 39.61 40.4
TraesCS3D01G209500.1 Wheat cytosol 38.96 39.74
HORVU3Hr1G049780.1 Barley cytosol 38.96 39.74
CDY55938 Canola cytosol 37.66 38.93
CDX85452 Canola cytosol 37.66 38.93
CDY38431 Canola cytosol 37.66 38.93
CDY16919 Canola cytosol 37.01 38.26
TraesCS3B01G238100.1 Wheat cytosol 24.03 37.0
HORVU6Hr1G009000.1 Barley cytosol, plastid, vacuole 51.3 35.11
CDX94648 Canola cytosol 30.52 33.33
CDY57455 Canola cytosol 30.52 33.33
CDY08096 Canola cytosol 29.22 32.61
CDY05886 Canola cytosol 29.22 32.61
CDY27183 Canola cytosol 30.52 29.75
CDX72102 Canola cytosol 29.87 29.11
CDX76017 Canola cytosol 29.87 29.11
CDY47384 Canola cytosol, extracellular 29.87 28.93
CDY06206 Canola cytosol 27.92 28.48
HORVU2Hr1G011060.1 Barley nucleus, plastid 27.27 27.1
CDX99542 Canola plastid 29.22 24.73
CDX86861 Canola plastid 29.22 24.73
CDY13354 Canola cytosol 25.97 22.47
CDX67533 Canola cytosol 25.97 22.47
CDX85985 Canola mitochondrion 15.58 20.0
CDY09978 Canola cytosol 28.57 15.07
Protein Annotations
Gene3D:3.30.70.100MapMan:35.1GO:A0A078CJS9EnsemblPlants:CDX76309ProteinID:CDX76309ProteinID:CDX76309.1
GO:GO:0003674GO:GO:0005488GO:GO:0006810GO:GO:0008150GO:GO:0030001GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00126677001InterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121PFAM:PF00403PFscan:PS50846
PANTHER:PTHR22814PANTHER:PTHR22814:SF155SUPFAM:SSF55008UniParc:UPI00025461BC::
Description
BnaA08g10910D
Coordinates
chrLK031807:-:264281..264820
Molecular Weight (calculated)
17207.4 Da
IEP (calculated)
8.601
GRAVY (calculated)
-0.351
Length
154 amino acids
Sequence
(BLAST)
001: MGVLDHVSEY FDCSSHGSSK RHKSLQTVNV RVLIDCEGCE RKVRRALEGM KGVRDVTIEA NAQKVTVVGY VEPNRVVARI IHRTGKRAEL YPFVPYDVVA
101: HPYASGVYDN RAPVGYVRNT EYDPHVSRLA RASSTEVRYT TAFSDENASG CVIM
Best Arabidopsis Sequence Match ( AT4G35060.1 )
(BLAST)
001: MGVLDHVSEY FDCSHGSSKR HKSLQTVDVR VLIDCEGCER KVRRALEGMR GIRDVTIEPN AQKVTVVGYV EPNKVVARII HRTGKRAELY PFVPYDVVAH
101: PYASGVYDNR APTGYVRNTE YDPHVSRLAR ASSTEVRYTT AFSDENASAC VVM
Arabidopsis Description
HIPP25HIPP25 [Source:UniProtKB/TrEMBL;Acc:A0A178V323]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.