Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G005790.3 | |
| HORVU2Hr1G077940.1 | |
| HORVU6Hr1G050140.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G38580.1 | HORVU0Hr1G005790.3 | AT4G27780.1 | 18823312 |
| AT5G66110.1 | HORVU2Hr1G077940.1 | AT1G54060.1 | 21798944 |
| AT5G66110.1 | HORVU6Hr1G050140.1 | AT1G54060.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G382700.1 | Wheat | mitochondrion, plastid | 93.71 | 92.55 |
| TraesCS7B01G285400.1 | Wheat | mitochondrion, plastid | 93.08 | 91.93 |
| TraesCS7D01G379100.1 | Wheat | mitochondrion, plastid | 92.45 | 91.3 |
| EES11880 | Sorghum | cytosol | 68.55 | 70.32 |
| Os04t0244800-01 | Rice | plasma membrane | 68.55 | 70.32 |
| Zm00001d004138_P001 | Maize | cytosol | 67.92 | 69.68 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 62.89 | 64.52 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 62.26 | 63.87 |
| Bra009662.1-P | Field mustard | cytosol | 47.8 | 62.81 |
| VIT_03s0038g02440.t01 | Wine grape | cytosol | 59.12 | 60.65 |
| VIT_04s0023g03910.t01 | Wine grape | cytosol | 45.28 | 59.5 |
| CDX88005 | Canola | cytosol | 53.46 | 58.62 |
| CDY07874 | Canola | cytosol | 53.46 | 58.62 |
| KRH60697 | Soybean | cytosol | 56.6 | 58.44 |
| PGSC0003DMT400009390 | Potato | cytosol | 57.23 | 57.23 |
| AT5G66110.1 | Thale cress | cytosol | 52.83 | 57.14 |
| AT4G38580.1 | Thale cress | cytosol | 54.72 | 56.86 |
| CDY65011 | Canola | cytosol | 54.72 | 56.86 |
| Bra033570.1-P | Field mustard | cytosol | 54.72 | 56.86 |
| CDY12089 | Canola | cytosol | 54.09 | 56.21 |
| Bra010738.1-P | Field mustard | cytosol | 54.09 | 56.21 |
| CDX72748 | Canola | cytosol | 54.09 | 56.21 |
| CDX90282 | Canola | cytosol | 54.09 | 56.21 |
| Solyc02g083550.1.1 | Tomato | cytosol | 55.97 | 55.97 |
| KRH29001 | Soybean | cytosol | 54.09 | 55.13 |
| Solyc01g111600.2.1 | Tomato | nucleus | 52.83 | 54.9 |
| PGSC0003DMT400015784 | Potato | cytosol | 52.83 | 54.9 |
| VIT_04s0023g03890.t01 | Wine grape | cytosol | 54.72 | 54.38 |
| CDY52653 | Canola | cytosol | 50.94 | 52.94 |
| Bra011581.1-P | Field mustard | cytosol | 50.94 | 52.94 |
| CDX69108 | Canola | cytosol | 50.94 | 52.94 |
| AT4G35060.1 | Thale cress | cytosol | 49.69 | 51.63 |
| CDX76309 | Canola | cytosol | 49.06 | 50.65 |
| Bra034669.1-P | Field mustard | cytosol | 49.06 | 50.65 |
| CDY17504 | Canola | cytosol | 48.43 | 50.0 |
| HORVU6Hr1G009000.1 | Barley | cytosol, plastid, vacuole | 67.92 | 48.0 |
| HORVU5Hr1G069380.2 | Barley | cytosol | 43.4 | 45.39 |
| HORVU5Hr1G057730.1 | Barley | cytosol | 45.28 | 44.72 |
| HORVU3Hr1G049780.1 | Barley | cytosol | 42.14 | 44.37 |
| KRH24318 | Soybean | cytosol, nucleus, plastid | 22.64 | 41.86 |
| HORVU4Hr1G017070.3 | Barley | cytosol | 43.4 | 40.59 |
| KRH28829 | Soybean | cytosol | 29.56 | 38.84 |
| HORVU3Hr1G072940.2 | Barley | cytosol | 28.3 | 28.66 |
| HORVU2Hr1G011060.1 | Barley | nucleus, plastid | 27.67 | 28.39 |
| HORVU7Hr1G080490.1 | Barley | cytosol | 28.3 | 26.01 |
| HORVU6Hr1G066220.1 | Barley | cytosol | 23.27 | 20.0 |
| HORVU4Hr1G085090.2 | Barley | plastid | 25.79 | 14.34 |
Protein Annotations
| EMBL:AK358282 | EnsemblPlants:HORVU7Hr1G090970.1 | EnsemblPlantsGene:HORVU7Hr1G090970 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF168 | PFAM:PF00403 | PFscan:PS50846 | SUPFAM:SSF55008 |
| UniParc:UPI0002005383 | UniProt:F2D325 | MapMan:35.1 | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D325]
Coordinates
chrchr7H:-:554451917..554453988
Molecular Weight (calculated)
17487.0 Da
IEP (calculated)
8.606
GRAVY (calculated)
-0.412
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFLEALSGL CRAWPAPLTR GHLQKGRQLE TVEMKVRIDC EGCESKIRKT LEGMDGVTGI DVVPRENRVT VTGYVDAAKV MRRVERKTGK RVEPWPYVPY
101: DVVAHPYAPG AYDKRAPAGY VRDVMANPDA APLARATSTE TRYTGAFSDD NPNAACAIM
101: DVVAHPYAPG AYDKRAPAGY VRDVMANPDA APLARATSTE TRYTGAFSDD NPNAACAIM
001: MGFRDICYRK HHKKLKQFQK VEIKVKMDCE GCERRVRKSV EGMKGVSKVT VDPKQSKLTV EGFVQPSKVV HRVMHRTGKK AELWPYVPYE VVPHPYAPGA
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM
Arabidopsis Description
HIPP27Heavy metal-associated isoprenylated plant protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZW1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.