Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034669.1-P Field mustard cytosol 98.7 98.7
CDX76309 Canola cytosol 98.7 98.7
CDY52653 Canola cytosol 94.16 94.77
AT4G35060.1 Thale cress cytosol 94.16 94.77
CDX69108 Canola cytosol 92.86 93.46
KRH60697 Soybean cytosol 74.03 74.03
CDX90282 Canola cytosol 71.43 71.9
CDY12089 Canola cytosol 70.78 71.24
CDY65011 Canola cytosol 70.13 70.59
VIT_03s0038g02440.t01 Wine grape cytosol 70.78 70.32
CDX72748 Canola cytosol 69.48 69.93
PGSC0003DMT400015784 Potato cytosol 67.53 67.97
Solyc01g111600.2.1 Tomato nucleus 66.88 67.32
KRH29001 Soybean cytosol 66.88 66.03
GSMUA_Achr4P25770_001 Banana cytosol, plastid 61.69 61.29
TraesCS2B01G077100.1 Wheat cytosol, plastid 59.74 59.35
TraesCS2D01G063000.1 Wheat cytosol, plastid 59.74 59.35
GSMUA_Achr1P02370_001 Banana cytosol, plastid 59.09 58.71
KRH24318 Soybean cytosol, nucleus, plastid 32.47 58.14
TraesCS2A01G064900.1 Wheat nucleus 58.44 58.06
EES11880 Sorghum cytosol 57.79 57.42
Os04t0244800-01 Rice plasma membrane 57.14 56.77
CDY07874 Canola cytosol 52.6 55.86
CDX88005 Canola cytosol 52.6 55.86
Zm00001d004138_P001 Maize cytosol 55.84 55.48
Os03t0156600-01 Rice cytosol 52.6 52.26
Zm00001d027720_P001 Maize cytosol 50.65 50.0
TraesCS6A01G043000.1 Wheat cytosol 50.65 49.06
TraesCS6B01G059000.1 Wheat cytosol 50.65 49.06
EER92834 Sorghum cytosol 49.35 48.72
TraesCS7B01G285400.1 Wheat mitochondrion, plastid 50.65 48.45
HORVU7Hr1G090970.1 Barley mitochondrion 50.0 48.43
TraesCS6D01G049600.1 Wheat cytosol 50.0 48.43
TraesCS7A01G382700.1 Wheat mitochondrion, plastid 50.0 47.83
CDX96299 Canola cytosol 46.1 47.33
CDX72773 Canola cytosol 46.1 47.33
TraesCS7D01G379100.1 Wheat mitochondrion, plastid 49.35 47.2
CDY12499 Canola cytosol 46.75 47.06
CDX75144 Canola cytosol 38.31 46.83
CDY25762 Canola cytosol 46.1 46.41
CDY21408 Canola cytosol 45.45 45.75
CDY04750 Canola cytosol 44.81 45.1
Zm00001d034978_P001 Maize cytosol 43.51 44.37
Os01t0507700-01 Rice plasma membrane 42.21 43.05
TraesCS5D01G250700.1 Wheat cytosol 42.21 42.76
TraesCS5A01G244000.1 Wheat cytosol 42.21 42.76
HORVU5Hr1G069380.2 Barley cytosol 42.21 42.76
TraesCS2D01G285700.1 Wheat cytosol 41.56 42.38
TraesCS2B01G304100.1 Wheat cytosol 41.56 42.38
TraesCS2A01G287200.1 Wheat cytosol 41.56 42.38
TraesCS5B01G242000.1 Wheat cytosol 41.56 42.11
CDY36193 Canola cytosol 40.91 42.0
EES14354 Sorghum cytosol 40.91 41.72
CDY42647 Canola cytosol 41.56 40.51
CDX86196 Canola cytosol 41.56 40.51
CDY41999 Canola cytosol 41.56 40.51
Zm00001d052760_P001 Maize cytosol 39.61 40.4
CDY55938 Canola cytosol 38.96 40.27
CDX85452 Canola cytosol 38.96 40.27
TraesCS3A01G206100.1 Wheat cytosol 38.96 39.74
CDY38431 Canola cytosol 38.31 39.6
HORVU3Hr1G049780.1 Barley cytosol 38.31 39.07
TraesCS3D01G209500.1 Wheat cytosol 38.31 39.07
CDY16919 Canola cytosol 37.66 38.93
TraesCS3B01G238100.1 Wheat cytosol 24.03 37.0
HORVU6Hr1G009000.1 Barley cytosol, plastid, vacuole 50.65 34.67
CDY57455 Canola cytosol 30.52 33.33
CDX94648 Canola cytosol 30.52 33.33
CDY08096 Canola cytosol 29.22 32.61
CDY05886 Canola cytosol 29.22 32.61
CDY27183 Canola cytosol 30.52 29.75
CDX72102 Canola cytosol 29.87 29.11
CDX76017 Canola cytosol 29.87 29.11
CDY47384 Canola cytosol, extracellular 29.87 28.93
CDY06206 Canola cytosol 27.92 28.48
HORVU2Hr1G011060.1 Barley nucleus, plastid 27.27 27.1
CDX99542 Canola plastid 29.87 25.27
CDX86861 Canola plastid 29.87 25.27
CDY13354 Canola cytosol 26.62 23.03
CDX67533 Canola cytosol 26.62 23.03
CDX85985 Canola mitochondrion 16.23 20.83
CDY09978 Canola cytosol 28.57 15.07
Protein Annotations
EnsemblPlants:CDY17504EnsemblPlantsGene:GSBRNA2T00095697001Gene3D:3.30.70.100GO:A0A078FWJ4GO:GO:0003674GO:GO:0005488
GO:GO:0006810GO:GO:0008150GO:GO:0030001GO:GO:0046872InterPro:HMA_domInterPro:HMA_dom_sf
InterPro:IPR006121PANTHER:PTHR22814PANTHER:PTHR22814:SF155PFAM:PF00403PFscan:PS50846ProteinID:CDY17504
ProteinID:CDY17504.1SUPFAM:SSF55008UniParc:UPI0004EB1D82UniProt:A0A078FWJ4MapMan:35.1:
Description
BnaC03g65590DBnaC03g65590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWJ4]
Coordinates
chrLK032074:-:350329..350868
Molecular Weight (calculated)
17307.5 Da
IEP (calculated)
8.601
GRAVY (calculated)
-0.377
Length
154 amino acids
Sequence
(BLAST)
001: MGVLDHVSEY FDCSSHGSSK RHKSLQTVDV RVLIDCEGCE RKVRRALERM KGVRDVTIEA NAQKVTVVGY VEPNRVVARI IHRTGKRAEL YPFVPYDVVA
101: HPYASGVYDN RAPVGYVRNT EYDPHVSRLA RASSTEVRYT TAFSDENASG CVIM
Best Arabidopsis Sequence Match ( AT4G35060.1 )
(BLAST)
001: MGVLDHVSEY FDCSHGSSKR HKSLQTVDVR VLIDCEGCER KVRRALEGMR GIRDVTIEPN AQKVTVVGYV EPNKVVARII HRTGKRAELY PFVPYDVVAH
101: PYASGVYDNR APTGYVRNTE YDPHVSRLAR ASSTEVRYTT AFSDENASAC VVM
Arabidopsis Description
HIPP25HIPP25 [Source:UniProtKB/TrEMBL;Acc:A0A178V323]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.