Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G08570.1 | CDX95914 | AT1G69600.1 | 18974936 |
| AT4G08570.1 | CDY01760 | AT1G69600.1 | 18974936 |
| AT4G08570.1 | CDY28566 | AT1G69600.1 | 18974936 |
| AT4G08570.1 | CDY44079 | AT1G69600.1 | 18974936 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36193 | Canola | cytosol | 95.24 | 80.0 |
| Bra037865.1-P | Field mustard | cytosol | 94.44 | 79.33 |
| AT4G08570.1 | Thale cress | cytosol | 88.1 | 74.0 |
| KRH53129 | Soybean | cytosol | 76.98 | 65.1 |
| KRH62410 | Soybean | cytosol, plastid | 75.4 | 63.76 |
| Solyc04g072700.2.1 | Tomato | cytosol, plastid | 58.73 | 49.33 |
| PGSC0003DMT400024481 | Potato | cytosol, plastid | 57.94 | 48.67 |
| CDY42647 | Canola | cytosol | 60.32 | 48.1 |
| CDY41999 | Canola | cytosol | 60.32 | 48.1 |
| CDX86196 | Canola | cytosol | 60.32 | 48.1 |
| PGSC0003DMT400024479 | Potato | cytosol, plastid | 57.14 | 48.0 |
| CDY21408 | Canola | cytosol | 57.94 | 47.71 |
| CDY04750 | Canola | cytosol | 57.94 | 47.71 |
| CDY25762 | Canola | cytosol | 56.35 | 46.41 |
| VIT_18s0001g04800.t01 | Wine grape | cytosol, plastid | 54.76 | 46.31 |
| CDY12499 | Canola | cytosol | 55.56 | 45.75 |
| CDX90282 | Canola | cytosol | 50.79 | 41.83 |
| CDY07874 | Canola | cytosol | 47.62 | 41.38 |
| CDX88005 | Canola | cytosol | 47.62 | 41.38 |
| CDY12089 | Canola | cytosol | 50.0 | 41.18 |
| CDX96299 | Canola | cytosol | 48.41 | 40.67 |
| CDX72773 | Canola | cytosol | 48.41 | 40.67 |
| CDX72748 | Canola | cytosol | 49.21 | 40.52 |
| CDY65011 | Canola | cytosol | 49.21 | 40.52 |
| CDY52653 | Canola | cytosol | 47.62 | 39.22 |
| CDX76309 | Canola | cytosol | 47.62 | 38.96 |
| CDX69108 | Canola | cytosol | 46.83 | 38.56 |
| CDY17504 | Canola | cytosol | 46.83 | 38.31 |
| CDY55938 | Canola | cytosol | 42.86 | 36.24 |
| CDX85452 | Canola | cytosol | 42.86 | 36.24 |
| CDY16919 | Canola | cytosol | 42.06 | 35.57 |
| CDY38431 | Canola | cytosol | 42.06 | 35.57 |
| CDY08096 | Canola | cytosol | 38.1 | 34.78 |
| CDY05886 | Canola | cytosol | 38.1 | 34.78 |
| CDX94648 | Canola | cytosol | 35.71 | 31.91 |
| CDY57455 | Canola | cytosol | 35.71 | 31.91 |
| CDY06206 | Canola | cytosol | 35.71 | 29.8 |
| CDX76017 | Canola | cytosol | 31.75 | 25.32 |
| CDY27183 | Canola | cytosol | 31.75 | 25.32 |
| CDY47384 | Canola | cytosol, extracellular | 31.75 | 25.16 |
| CDX72102 | Canola | cytosol | 30.95 | 24.68 |
| CDY13354 | Canola | cytosol | 31.75 | 22.47 |
| CDX67533 | Canola | cytosol | 31.75 | 22.47 |
| CDX86861 | Canola | plastid | 30.16 | 20.88 |
| CDX99542 | Canola | plastid | 30.16 | 20.88 |
| CDX85985 | Canola | mitochondrion | 19.84 | 20.83 |
| CDY09978 | Canola | cytosol | 36.51 | 15.75 |
Protein Annotations
| EnsemblPlants:CDX75144 | EnsemblPlantsGene:GSBRNA2T00118921001 | Gene3D:3.30.70.100 | GO:A0A078CGB2 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF84 | PFAM:PF00403 | PFscan:PS50846 | ProteinID:CDX75144 |
| ProteinID:CDX75144.1 | SUPFAM:SSF55008 | UniParc:UPI0004EC7FFA | MapMan:35.1 | : | : |
Description
BnaC09g25380D
Coordinates
chrLK031803:-:923073..925627
Molecular Weight (calculated)
14096.2 Da
IEP (calculated)
8.884
GRAVY (calculated)
-0.176
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTVALRVAC IDCEGCERKI KQILFGVKGV KSVVVDAKQQ KVTVMGYIEP KKVLEAAKST RKKVELWPYV PYTMVANPYI SQAYDKKAPP NMVRKVLDTA
101: SVNETTIDDS YSIIFSDENP NSCSIM
101: SVNETTIDDS YSIIFSDENP NSCSIM
001: MGVEGTMEYI SDLLKKRKRK KKKQMQTVAL RVARIDCEGC ERKIKHVLSG VKGVKSVDVD VKLQKVTVTG YIDPKKVLEA AKSTKKKVEL WPYVPYTMVA
101: NPYISQAYDK KAPPNMVRKV PDTASVNETT VDDSYTIMFS DENPNSCAIM
101: NPYISQAYDK KAPPNMVRKV PDTASVNETT VDDSYTIMFS DENPNSCAIM
Arabidopsis Description
HIPP24Heavy metal-associated isoprenylated plant protein 24 [Source:UniProtKB/Swiss-Prot;Acc:O81464]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.