Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400024481 | Potato | cytosol, plastid | 98.67 | 98.67 |
| PGSC0003DMT400024479 | Potato | cytosol, plastid | 98.0 | 98.0 |
| KRH62410 | Soybean | cytosol, plastid | 70.67 | 71.14 |
| KRH53129 | Soybean | cytosol | 70.0 | 70.47 |
| VIT_18s0001g04800.t01 | Wine grape | cytosol, plastid | 64.0 | 64.43 |
| Solyc04g054500.2.1 | Tomato | cytosol | 62.67 | 61.84 |
| AT4G08570.1 | Thale cress | cytosol | 61.33 | 61.33 |
| Bra037865.1-P | Field mustard | cytosol | 60.0 | 60.0 |
| CDY36193 | Canola | cytosol | 60.0 | 60.0 |
| CDX75144 | Canola | cytosol | 49.33 | 58.73 |
| Solyc05g051820.2.1 | Tomato | cytosol | 57.33 | 55.84 |
| Solyc04g007630.1.1 | Tomato | cytosol | 50.0 | 51.02 |
| Solyc01g111600.2.1 | Tomato | nucleus | 50.0 | 49.02 |
| Solyc02g091300.2.1 | Tomato | cytosol, plastid | 46.0 | 46.62 |
| Solyc03g043640.2.1 | Tomato | cytosol | 44.0 | 44.9 |
| Solyc02g083550.1.1 | Tomato | cytosol | 46.67 | 44.03 |
| Solyc03g025790.2.1 | Tomato | cytosol | 32.0 | 34.53 |
| Solyc07g055010.2.1 | Tomato | extracellular | 30.67 | 30.46 |
| Solyc02g076880.2.1 | Tomato | cytosol | 27.33 | 28.67 |
| Solyc08g075880.2.1 | Tomato | endoplasmic reticulum, plastid | 29.33 | 24.58 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0030001 | GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | UniProt:K4BTQ7 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF84 |
| SUPFAM:SSF55008 | EnsemblPlantsGene:Solyc04g072700.2 | EnsemblPlants:Solyc04g072700.2.1 | UniParc:UPI0002766FC9 | SEG:seg | : |
Description
No Description!
Coordinates
chr4:+:59659371..59660439
Molecular Weight (calculated)
16469.1 Da
IEP (calculated)
10.049
GRAVY (calculated)
-0.375
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVSGTLEYL SEVLSNVKKS KKKKQIATVS IKIRMDCEGC ARKVKNALSK VKGAKSVDVD LKQQKATVTG FVEPKKVLKA AKSTGKKCEI WPYVPYSMVA
101: HPYAAGVYDK KAPPNFVRAT TDPSVAHLNP VEEQYSLMFS DENPNACNIM
101: HPYAAGVYDK KAPPNFVRAT TDPSVAHLNP VEEQYSLMFS DENPNACNIM
001: MGVEGTMEYI SDLLKKRKRK KKKQMQTVAL RVARIDCEGC ERKIKHVLSG VKGVKSVDVD VKLQKVTVTG YIDPKKVLEA AKSTKKKVEL WPYVPYTMVA
101: NPYISQAYDK KAPPNMVRKV PDTASVNETT VDDSYTIMFS DENPNSCAIM
101: NPYISQAYDK KAPPNMVRKV PDTASVNETT VDDSYTIMFS DENPNSCAIM
Arabidopsis Description
HIPP24Heavy metal-associated isoprenylated plant protein 24 [Source:UniProtKB/Swiss-Prot;Acc:O81464]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.