Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0031g01160.t01 | Wine grape | cytosol | 73.83 | 72.85 |
| PGSC0003DMT400024479 | Potato | cytosol, plastid | 64.43 | 64.0 |
| PGSC0003DMT400024481 | Potato | cytosol, plastid | 64.43 | 64.0 |
| Solyc04g072700.2.1 | Tomato | cytosol, plastid | 64.43 | 64.0 |
| KRH62410 | Soybean | cytosol, plastid | 63.09 | 63.09 |
| KRH53129 | Soybean | cytosol | 61.74 | 61.74 |
| AT4G08570.1 | Thale cress | cytosol | 59.06 | 58.67 |
| Bra037865.1-P | Field mustard | cytosol | 57.05 | 56.67 |
| VIT_01s0011g04700.t01 | Wine grape | cytosol | 55.03 | 55.78 |
| CDY36193 | Canola | cytosol | 55.7 | 55.33 |
| CDX75144 | Canola | cytosol | 46.31 | 54.76 |
| VIT_14s0006g01800.t01 | Wine grape | cytosol | 53.02 | 54.11 |
| VIT_03s0038g02440.t01 | Wine grape | cytosol | 55.03 | 52.9 |
| VIT_04s0023g03910.t01 | Wine grape | cytosol | 40.27 | 49.59 |
| VIT_04s0023g03890.t01 | Wine grape | cytosol | 50.34 | 46.88 |
| VIT_02s0025g03010.t01 | Wine grape | cytosol, mitochondrion | 36.24 | 38.03 |
| VIT_12s0028g02190.t01 | Wine grape | cytosol | 36.91 | 37.67 |
| VIT_08s0040g00130.t01 | Wine grape | cytosol | 30.87 | 36.8 |
| VIT_10s0003g01220.t01 | Wine grape | cytosol | 35.57 | 36.55 |
| VIT_16s0050g00150.t01 | Wine grape | mitochondrion, plastid | 33.56 | 29.07 |
Protein Annotations
| EntrezGene:100259038 | wikigene:100259038 | Gene3D:3.30.70.100 | MapMan:35.1 | ProteinID:CBI19116 | ProteinID:CBI19116.3 |
| UniProt:E0CRG2 | EMBL:FN595227 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0030001 | GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | EntrezGene:LOC100259038 | wikigene:LOC100259038 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 |
| PANTHER:PTHR22814:SF171 | SUPFAM:SSF55008 | UniParc:UPI00015C8258 | ArrayExpress:VIT_18s0001g04800 | EnsemblPlantsGene:VIT_18s0001g04800 | EnsemblPlants:VIT_18s0001g04800.t01 |
| unigene:Vvi.6069 | RefSeq:XP_002285811 | RefSeq:XP_002285811.1 | : | : | : |
Description
No Description!
Coordinates
chr18:+:4003656..4004282
Molecular Weight (calculated)
16483.0 Da
IEP (calculated)
9.972
GRAVY (calculated)
-0.456
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVVATLEYF SDLLSSKKGK KRKQLQTVDL KVRMDCEGCQ LKVKKALSSL KGVKSVDVNL KQQKASVTGY ADAKKVLKKA QSTGKKAELW PYVPYNLVAH
101: PYVAQVYDKK APPGYVRSSE NPAITAMSPL EEQYTTMFSD DNPNACSIM
101: PYVAQVYDKK APPGYVRSSE NPAITAMSPL EEQYTTMFSD DNPNACSIM
001: MGVGGTLEYI SELIGNGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKIK NSLSSLKGVK TVEINKKQQK VTVSGYADAS KVLKKAKATG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM
Arabidopsis Description
HIPP23Heavy metal-associated isoprenylated plant protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O65657]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.