Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_04s0023g02110.t01 | |
| VIT_09s0002g02400.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G17450.1 | VIT_09s0002g02400.t01 | AT3G13710.1 | 21798944 |
| AT5G17450.1 | VIT_04s0023g02110.t01 | AT3G50910.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0011g04700.t01 | Wine grape | cytosol | 79.45 | 78.91 |
| KRG93769 | Soybean | cytosol | 50.0 | 75.26 |
| PGSC0003DMT400078635 | Potato | cytosol, plastid | 76.03 | 75.0 |
| Solyc02g091300.2.1 | Tomato | cytosol, plastid | 76.03 | 75.0 |
| KRG93786 | Soybean | cytosol, plastid | 48.63 | 73.2 |
| KRH76245 | Soybean | cytosol | 43.84 | 72.73 |
| Solyc03g043640.2.1 | Tomato | cytosol | 71.23 | 70.75 |
| KRG93169 | Soybean | cytosol | 69.18 | 70.14 |
| KRH01671 | Soybean | cytosol | 68.49 | 68.97 |
| KRH70455 | Soybean | cytosol | 67.81 | 68.28 |
| KRH15973 | Soybean | cytosol, plastid | 50.68 | 67.89 |
| CDY55938 | Canola | cytosol | 69.18 | 67.79 |
| CDX85452 | Canola | cytosol | 69.18 | 67.79 |
| Bra023619.1-P | Field mustard | cytosol | 69.18 | 67.79 |
| AT5G17450.1 | Thale cress | cytosol | 69.18 | 67.79 |
| GSMUA_Achr2P07910_001 | Banana | cytosol | 69.86 | 67.55 |
| CDY38431 | Canola | cytosol | 68.49 | 67.11 |
| Bra013976.1-P | Field mustard | cytosol | 67.81 | 66.44 |
| CDY16919 | Canola | cytosol | 67.81 | 66.44 |
| GSMUA_Achr1P12840_001 | Banana | cytosol | 68.49 | 66.23 |
| PGSC0003DMT400043033 | Potato | cytosol | 66.44 | 61.39 |
| VIT_07s0031g01160.t01 | Wine grape | cytosol | 60.96 | 58.94 |
| VIT_18s0001g04800.t01 | Wine grape | cytosol, plastid | 54.11 | 53.02 |
| VIT_03s0038g02440.t01 | Wine grape | cytosol | 54.79 | 51.61 |
| VIT_04s0023g03890.t01 | Wine grape | cytosol | 54.79 | 50.0 |
| VIT_04s0023g03910.t01 | Wine grape | cytosol | 41.1 | 49.59 |
| VIT_02s0025g03010.t01 | Wine grape | cytosol, mitochondrion | 42.47 | 43.66 |
| VIT_08s0040g00130.t01 | Wine grape | cytosol | 32.19 | 37.6 |
| VIT_12s0028g02190.t01 | Wine grape | cytosol | 35.62 | 35.62 |
| VIT_10s0003g01220.t01 | Wine grape | cytosol | 33.56 | 33.79 |
| VIT_16s0050g00150.t01 | Wine grape | mitochondrion, plastid | 34.93 | 29.65 |
Protein Annotations
| EntrezGene:100255386 | wikigene:100255386 | Gene3D:3.30.70.100 | MapMan:35.1 | EMBL:AM464095 | ProteinID:CAN63619 |
| ProteinID:CAN63619.1 | ProteinID:CBI33560 | ProteinID:CBI33560.3 | UniProt:D7TST8 | EMBL:FN596245 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0030001 | GO:GO:0046872 |
| GO:GO:0046914 | GO:GO:0046916 | GO:GO:0055073 | GO:GO:0071585 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | EntrezGene:LOC100255386 | wikigene:LOC100255386 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 |
| PANTHER:PTHR22814:SF110 | SUPFAM:SSF55008 | UniParc:UPI00015C95E8 | ArrayExpress:VIT_14s0006g01800 | EnsemblPlantsGene:VIT_14s0006g01800 | EnsemblPlants:VIT_14s0006g01800.t01 |
| unigene:Vvi.20793 | RefSeq:XP_002272293 | RefSeq:XP_002272293.1 | : | : | : |
Description
No Description!
Coordinates
chr14:-:18316603..18317642
Molecular Weight (calculated)
16400.7 Da
IEP (calculated)
9.977
GRAVY (calculated)
-0.446
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MGALDYFSNF CTVTSTKGKR KPMQTVEIKV KMDCDGCERR VKNAVTSMRG VKSVEVIRKQ SRVTVTGYVD ANKVLKRVKS TGKRAEFWPY IPYNLVSYPY
101: ATQAYDKRAP AGYVRNVVQA VAVPNDPEDR ITSLFSDDNP NACSIM
101: ATQAYDKRAP AGYVRNVVQA VAVPNDPEDR ITSLFSDDNP NACSIM
001: MGAFDYISSF CSYTYANAKT KRKPLQTVDI KVKMDCDGCE RRVRNVVRRM KGVKSVEVNR KQSRITVNGH VDPNKVLKRV KSTGKKAEFW PYIPQHMVYY
101: PFAPGMYDKR APAGHIRNPT QSFPTANAPE ENYVSLFSDD NVHAACSIM
101: PFAPGMYDKR APAGHIRNPT QSFPTANAPE ENYVSLFSDD NVHAACSIM
Arabidopsis Description
HIPP21Heavy metal-associated isoprenylated plant protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF57]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.