CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62410	Soybean	cytosol, plastid	95.3	95.3
AT4G08570.1	Thale cress	cytosol	77.85	77.33
CDX75144	Canola	cytosol	65.1	76.98
Bra037865.1-P	Field mustard	cytosol	75.17	74.67
CDY36193	Canola	cytosol	74.5	74.0
Solyc04g072700.2.1	Tomato	cytosol, plastid	70.47	70.0
PGSC0003DMT400024481	Potato	cytosol, plastid	70.47	70.0
PGSC0003DMT400024479	Potato	cytosol, plastid	70.47	70.0
VIT_18s0001g04800.t01	Wine grape	cytosol, plastid	61.74	61.74
KRH59402	Soybean	cytosol	62.42	60.78
KRH43240	Soybean	cytosol	62.42	60.78
KRH31264	Soybean	cytosol	61.07	58.71
KRG97609	Soybean	cytosol	59.73	56.69
KRH35768	Soybean	cytosol, plastid	48.99	50.0
KRG90986	Soybean	cytosol, plastid	48.32	49.32
KRH38224	Soybean	cytosol	48.32	48.98
KRH60697	Soybean	cytosol	48.32	46.75
KRH29001	Soybean	cytosol	48.32	46.15
KRG93769	Soybean	cytosol	29.53	45.36
KRG93169	Soybean	cytosol	42.95	44.44
KRG93786	Soybean	cytosol, plastid	28.86	44.33
KRH01671	Soybean	cytosol	42.95	44.14
KRH76245	Soybean	cytosol	25.5	43.18
KRH24318	Soybean	cytosol, nucleus, plastid	24.83	43.02
KRH28829	Soybean	cytosol	34.9	42.98
KRH70455	Soybean	cytosol	40.94	42.07
KRH38229	Soybean	cytosol	40.94	41.5
KRH15973	Soybean	cytosol, plastid	30.2	41.28
KRH38480	Soybean	cytosol	28.86	36.13
KRH09015	Soybean	cytosol	32.89	35.51
KRH58951	Soybean	cytosol	28.86	30.71
KRH57823	Soybean	cytosol	30.2	30.41
KRH27043	Soybean	cytosol	28.86	30.28
KRH22286	Soybean	cytosol	28.86	30.28
KRH34236	Soybean	cytosol	35.57	29.78
KRG92555	Soybean	cytosol	34.23	28.65

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02003451	EnsemblPlantsGene:GLYMA_06G106700	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914	GO:GO:0046916
InterPro:HMA_dom	InterPro:HMA_dom_sf	UniProt:I1KA23	InterPro:IPR006121	EnsemblPlants:KRH53129	ProteinID:KRH53129
ProteinID:KRH53129.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF84	SUPFAM:SSF55008
UniParc:UPI00023395B4	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:8577916..8579160

Molecular Weight (calculated)

16706.5 Da

IEP (calculated)

10.164

GRAVY (calculated)

-0.477

Length

149 amino acids

Sequence
(BLAST)

001: MGVQGTMEYL SDLLSTKKKK KKKQVQTVAL KIRMDCEGCA RKVKHVLFGV KGAKSVEVDL KQQKATVTGY VEPKKVLKAA QSTKKKVELW PYVPYSMVAN
101: PYISQAYDKK APPNMVRKVA DTANISETTV DDRYIQIFSD ENPNACSIM

Best Arabidopsis Sequence Match ( AT4G08570.1 )
(BLAST)

001: MGVEGTMEYI SDLLKKRKRK KKKQMQTVAL RVARIDCEGC ERKIKHVLSG VKGVKSVDVD VKLQKVTVTG YIDPKKVLEA AKSTKKKVEL WPYVPYTMVA
101: NPYISQAYDK KAPPNMVRKV PDTASVNETT VDDSYTIMFS DENPNSCAIM

Arabidopsis Description

HIPP24Heavy metal-associated isoprenylated plant protein 24 [Source:UniProtKB/Swiss-Prot;Acc:O81464]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.