Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G08570.1 | CDX95914 | AT1G69600.1 | 18974936 |
| AT4G08570.1 | CDY01760 | AT1G69600.1 | 18974936 |
| AT4G08570.1 | CDY28566 | AT1G69600.1 | 18974936 |
| AT4G08570.1 | CDY44079 | AT1G69600.1 | 18974936 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037865.1-P | Field mustard | cytosol | 98.0 | 98.0 |
| CDX75144 | Canola | cytosol | 80.0 | 95.24 |
| AT4G08570.1 | Thale cress | cytosol | 88.67 | 88.67 |
| KRH62410 | Soybean | cytosol, plastid | 74.0 | 74.5 |
| KRH53129 | Soybean | cytosol | 74.0 | 74.5 |
| Solyc04g072700.2.1 | Tomato | cytosol, plastid | 60.0 | 60.0 |
| PGSC0003DMT400024481 | Potato | cytosol, plastid | 58.67 | 58.67 |
| PGSC0003DMT400024479 | Potato | cytosol, plastid | 58.67 | 58.67 |
| CDY42647 | Canola | cytosol | 61.33 | 58.23 |
| CDY41999 | Canola | cytosol | 61.33 | 58.23 |
| CDX86196 | Canola | cytosol | 61.33 | 58.23 |
| VIT_18s0001g04800.t01 | Wine grape | cytosol, plastid | 55.33 | 55.7 |
| CDY04750 | Canola | cytosol | 53.33 | 52.29 |
| CDY21408 | Canola | cytosol | 52.67 | 51.63 |
| CDY25762 | Canola | cytosol | 51.33 | 50.33 |
| CDY12499 | Canola | cytosol | 50.67 | 49.67 |
| CDX96299 | Canola | cytosol | 44.67 | 44.67 |
| CDX72773 | Canola | cytosol | 44.67 | 44.67 |
| CDX90282 | Canola | cytosol | 45.33 | 44.44 |
| CDY12089 | Canola | cytosol | 44.67 | 43.79 |
| CDY65011 | Canola | cytosol | 44.0 | 43.14 |
| CDX72748 | Canola | cytosol | 44.0 | 43.14 |
| CDX88005 | Canola | cytosol | 41.33 | 42.76 |
| CDY07874 | Canola | cytosol | 41.33 | 42.76 |
| CDX76309 | Canola | cytosol | 42.67 | 41.56 |
| CDY52653 | Canola | cytosol | 42.0 | 41.18 |
| CDX85452 | Canola | cytosol | 40.67 | 40.94 |
| CDY55938 | Canola | cytosol | 40.67 | 40.94 |
| CDY17504 | Canola | cytosol | 42.0 | 40.91 |
| CDX69108 | Canola | cytosol | 41.33 | 40.52 |
| CDY38431 | Canola | cytosol | 40.0 | 40.27 |
| CDY16919 | Canola | cytosol | 39.33 | 39.6 |
| CDY08096 | Canola | cytosol | 33.33 | 36.23 |
| CDY05886 | Canola | cytosol | 33.33 | 36.23 |
| CDX94648 | Canola | cytosol | 30.0 | 31.91 |
| CDY57455 | Canola | cytosol | 30.0 | 31.91 |
| CDY06206 | Canola | cytosol | 30.0 | 29.8 |
| CDY47384 | Canola | cytosol, extracellular | 28.67 | 27.04 |
| CDY27183 | Canola | cytosol | 28.0 | 26.58 |
| CDX76017 | Canola | cytosol | 28.0 | 26.58 |
| CDX72102 | Canola | cytosol | 27.33 | 25.95 |
| CDX86861 | Canola | plastid | 30.0 | 24.73 |
| CDX99542 | Canola | plastid | 30.0 | 24.73 |
| CDY13354 | Canola | cytosol | 29.33 | 24.72 |
| CDX67533 | Canola | cytosol | 29.33 | 24.72 |
| CDX85985 | Canola | mitochondrion | 18.0 | 22.5 |
| CDY09978 | Canola | cytosol | 33.33 | 17.12 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:A0A078HH69 | UniProt:A0A078HH69 | EnsemblPlants:CDY36193 | ProteinID:CDY36193 |
| ProteinID:CDY36193.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 |
| GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00060078001 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 |
| PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF84 | SUPFAM:SSF55008 | UniParc:UPI0004EF05BD | SEG:seg |
Description
BnaAnng04390DBnaAnng04390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HH69]
Coordinates
chrLK032369:-:96268..97513
Molecular Weight (calculated)
17058.0 Da
IEP (calculated)
10.123
GRAVY (calculated)
-0.465
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVERTMEYI SEFLKMRRKK KKKPMQTVAL RVARIDCEGC ERKIKQILSG VKGVKSVVVD AKQQKVTVMG YIEPKKVLEA AKSTRKKVEL WPYVPYTMVA
101: NPYISQAYDK KAPPNMVRKV PDTASVNETT VDDSYAIMFS DENPNSCSIM
101: NPYISQAYDK KAPPNMVRKV PDTASVNETT VDDSYAIMFS DENPNSCSIM
001: MGVEGTMEYI SDLLKKRKRK KKKQMQTVAL RVARIDCEGC ERKIKHVLSG VKGVKSVDVD VKLQKVTVTG YIDPKKVLEA AKSTKKKVEL WPYVPYTMVA
101: NPYISQAYDK KAPPNMVRKV PDTASVNETT VDDSYTIMFS DENPNSCAIM
101: NPYISQAYDK KAPPNMVRKV PDTASVNETT VDDSYTIMFS DENPNSCAIM
Arabidopsis Description
HIPP24Heavy metal-associated isoprenylated plant protein 24 [Source:UniProtKB/Swiss-Prot;Acc:O81464]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.