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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY42647 Canola cytosol 100.0 100.0
Bra011840.1-P Field mustard cytosol 99.37 99.37
CDY41999 Canola cytosol 99.37 99.37
AT4G39700.1 Thale cress cytosol 93.67 93.67
PGSC0003DMT400056666 Potato cytosol 75.32 78.29
Solyc04g054500.2.1 Tomato cytosol 75.32 78.29
KRH59402 Soybean cytosol 74.68 77.12
KRH43240 Soybean cytosol 74.68 77.12
KRH31264 Soybean cytosol 73.42 74.84
VIT_07s0031g01160.t01 Wine grape cytosol 70.25 73.51
PGSC0003DMT400056199 Potato cytosol 71.52 73.38
KRG97609 Soybean cytosol 70.89 71.34
Solyc05g051820.2.1 Tomato cytosol 68.99 70.78
GSMUA_Achr4P01830_001 Banana cytosol 66.46 70.47
HORVU5Hr1G057730.1 Barley cytosol 69.62 68.32
TraesCS5D01G199500.1 Wheat cytosol 68.99 68.12
TraesCS5B01G191700.1 Wheat cytosol 68.99 67.7
TraesCS5A01G191400.1 Wheat cytosol 68.35 67.5
GSMUA_Achr3P04460_001 Banana cytosol 62.66 66.44
EER96651 Sorghum cytosol 66.46 65.22
GSMUA_Achr3P07890_001 Banana cytosol, mitochondrion, plastid 60.76 64.43
EER99736 Sorghum cytosol 67.72 63.69
Zm00001d020257_P001 Maize cytosol 65.19 63.58
TraesCS2A01G160700.1 Wheat cytosol 64.56 62.96
TraesCS2B01G186900.1 Wheat cytosol 64.56 62.96
TraesCS2D01G168000.1 Wheat cytosol 64.56 62.96
GSMUA_Achr10P... Banana cytosol 57.59 62.33
CDY36193 Canola cytosol 58.23 61.33
Os03t0383900-01 Rice cytosol 60.13 60.51
CDX75144 Canola cytosol 48.1 60.32
Zm00001d005656_P001 Maize mitochondrion 60.76 59.63
GSMUA_Achr7P11680_001 Banana cytosol 55.7 59.06
Os08t0403300-00 Rice cytosol 55.06 58.0
CDY21408 Canola cytosol 53.8 55.56
CDY04750 Canola cytosol 53.8 55.56
CDX96299 Canola cytosol 52.53 55.33
CDX72773 Canola cytosol 52.53 55.33
CDY25762 Canola cytosol 51.9 53.59
CDY12499 Canola cytosol 51.9 53.59
Zm00001d032291_P001 Maize cytosol 48.73 53.47
EES13808 Sorghum cytosol 48.73 53.1
TraesCS4B01G105100.1 Wheat mitochondrion, plastid 49.37 52.7
TraesCS4A01G211400.1 Wheat mitochondrion, plastid 48.73 52.03
TraesCS4D01G102000.1 Wheat mitochondrion, plastid 48.73 52.03
Os09t0364800-01 Rice cytosol, nucleus 35.44 50.0
CDY65011 Canola cytosol 46.84 48.37
CDX90282 Canola cytosol 46.84 48.37
CDX72748 Canola cytosol 46.84 48.37
CDY12089 Canola cytosol 46.2 47.71
CDY55938 Canola cytosol 43.67 46.31
CDX85452 Canola cytosol 43.67 46.31
CDX88005 Canola cytosol 42.41 46.21
CDY07874 Canola cytosol 42.41 46.21
CDY38431 Canola cytosol 43.04 45.64
HORVU4Hr1G017070.3 Barley cytosol 48.73 45.29
CDY16919 Canola cytosol 42.41 44.97
CDY52653 Canola cytosol 40.51 41.83
CDX76309 Canola cytosol 40.51 41.56
CDY17504 Canola cytosol 40.51 41.56
CDX69108 Canola cytosol 39.87 41.18
CDY08096 Canola cytosol 34.18 39.13
CDY05886 Canola cytosol 34.18 39.13
CDY57455 Canola cytosol 30.38 34.04
CDX94648 Canola cytosol 30.38 34.04
CDY06206 Canola cytosol 32.28 33.77
CDY27183 Canola cytosol 33.54 33.54
CDX76017 Canola cytosol 32.91 32.91
CDX72102 Canola cytosol 32.91 32.91
CDY47384 Canola cytosol, extracellular 32.91 32.7
CDY13354 Canola cytosol 33.54 29.78
CDX67533 Canola cytosol 33.54 29.78
CDX86861 Canola plastid 34.18 29.67
CDX99542 Canola plastid 34.18 29.67
CDX85985 Canola mitochondrion 20.89 27.5
CDY09978 Canola cytosol 34.81 18.84
Protein Annotations
Gene3D:3.30.70.100MapMan:35.1GO:A0A078HXR2UniProt:A0A078HXR2EnsemblPlants:CDX86196ProteinID:CDX86196
ProteinID:CDX86196.1ProteinID:CDY42647.1GO:GO:0003674GO:GO:0005488GO:GO:0006810GO:GO:0008150
GO:GO:0030001GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00144275001InterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121
PFAM:PF00403PFscan:PS50846PANTHER:PTHR22814PANTHER:PTHR22814:SF171SUPFAM:SSF55008UniParc:UPI0004EC2DDA
Description
BnaA06g29130DBnaA06g29130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXR2]
Coordinates
chrLK031845:-:287321..288997
Molecular Weight (calculated)
17332.9 Da
IEP (calculated)
9.884
GRAVY (calculated)
-0.529
Length
158 amino acids
Sequence
(BLAST)
001: MGVGGTLEYI SELIGSGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKVK NSLSSLKGVK SVEINKKQQK VTVSGYAEAS KVLKKAKSTG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKMDPYVT TGTMAVDNDD PSYTSMFSDD NPNACSIM
Best Arabidopsis Sequence Match ( AT4G39700.1 )
(BLAST)
001: MGVGGTLEYI SELIGNGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKIK NSLSSLKGVK TVEINKKQQK VTVSGYADAS KVLKKAKATG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM
Arabidopsis Description
HIPP23Heavy metal-associated isoprenylated plant protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O65657]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.