Factsheet for TraesCS5A01G191400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G191700.1	Wheat	cytosol	99.38	98.76
TraesCS5D01G199500.1	Wheat	cytosol	98.75	98.75
HORVU5Hr1G057730.1	Barley	cytosol	98.75	98.14
Zm00001d020257_P001	Maize	cytosol	86.25	85.19
EER96651	Sorghum	cytosol	85.62	85.09
GSMUA_Achr4P01830_001	Banana	cytosol	73.75	79.19
Zm00001d005656_P001	Maize	mitochondrion	78.75	78.26
Os09t0364800-01	Rice	cytosol, nucleus	53.12	75.89
GSMUA_Achr3P04460_001	Banana	cytosol	69.38	74.5
GSMUA_Achr3P07890_001	Banana	cytosol, mitochondrion, plastid	69.38	74.5
KRH43240	Soybean	cytosol	67.5	70.59
KRH59402	Soybean	cytosol	66.88	69.93
Solyc04g054500.2.1	Tomato	cytosol	65.0	68.42
Bra011840.1-P	Field mustard	cytosol	67.5	68.35
CDX86196	Canola	cytosol	67.5	68.35
CDY41999	Canola	cytosol	67.5	68.35
CDY42647	Canola	cytosol	67.5	68.35
TraesCS4A01G211400.1	Wheat	mitochondrion, plastid	62.5	67.57
AT4G39700.1	Thale cress	cytosol	66.25	67.09
VIT_07s0031g01160.t01	Wine grape	cytosol	62.5	66.23
PGSC0003DMT400056666	Potato	cytosol	61.88	65.13
KRH31264	Soybean	cytosol	62.5	64.52
KRG97609	Soybean	cytosol	60.62	61.78
PGSC0003DMT400056199	Potato	cytosol	59.38	61.69
Solyc05g051820.2.1	Tomato	cytosol	59.38	61.69
TraesCS2A01G160700.1	Wheat	cytosol	59.38	58.64
TraesCS2A01G064900.1	Wheat	nucleus	55.0	56.77
TraesCS6A01G043000.1	Wheat	cytosol	48.75	49.06
TraesCS2A01G287200.1	Wheat	cytosol	45.62	48.34
TraesCS3A01G206100.1	Wheat	cytosol	45.0	47.68
TraesCS5A01G244000.1	Wheat	cytosol	45.0	47.37
TraesCS7A01G382700.1	Wheat	mitochondrion, plastid	45.0	44.72
TraesCS6A01G259700.1	Wheat	mitochondrion	29.38	32.87
TraesCS5A01G516900.1	Wheat	plastid	35.0	28.72
TraesCS7A01G345500.1	Wheat	cytosol	28.75	28.05
TraesCS1A01G200700.1	Wheat	cytosol, plastid	30.62	25.13

Protein Annotations

EnsemblPlants:TraesCS5A01G191400.1	EnsemblPlantsGene:TraesCS5A01G191400	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PANTHER:PTHR22814	PANTHER:PTHR22814:SF165	PFAM:PF00403	PFscan:PS50846	SEG:seg	SUPFAM:SSF55008
TIGR:cd00371	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:395805122..395805742

Molecular Weight (calculated)

17689.4 Da

IEP (calculated)

10.007

GRAVY (calculated)

-0.522

Length

160 amino acids

Sequence
(BLAST)

001: MGVGGTLDYL SELLGGGGRR RSYKQKRKQF QTVELKVRMD CDGCELKVRN ALSGMKGVQS VEINRKQYKV TVQGFVEPHK VVKRVQATGK KAEIWPYIPY
101: NLVAHPYAAQ TYDKKAPPGY VRKVDAVMPV ASYGGPGAGA QEERLTTMFS DDNPNACSVM

Best Arabidopsis Sequence Match ( AT4G39700.1 )
(BLAST)

001: MGVGGTLEYI SELIGNGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKIK NSLSSLKGVK TVEINKKQQK VTVSGYADAS KVLKKAKATG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM

Arabidopsis Description

HIPP23Heavy metal-associated isoprenylated plant protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O65657]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.