Factsheet for Zm00001d020257_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96651	Sorghum	cytosol	94.44	95.03
Zm00001d005656_P001	Maize	mitochondrion	87.04	87.58
HORVU5Hr1G057730.1	Barley	cytosol	86.42	86.96
TraesCS5B01G191700.1	Wheat	cytosol	85.8	86.34
TraesCS5D01G199500.1	Wheat	cytosol	85.19	86.25
TraesCS5A01G191400.1	Wheat	cytosol	85.19	86.25
GSMUA_Achr4P01830_001	Banana	cytosol	71.6	77.85
Os09t0364800-01	Rice	cytosol, nucleus	53.7	77.68
GSMUA_Achr3P04460_001	Banana	cytosol	69.75	75.84
GSMUA_Achr3P07890_001	Banana	cytosol, mitochondrion, plastid	69.14	75.17
KRH43240	Soybean	cytosol	68.52	72.55
KRH59402	Soybean	cytosol	67.9	71.9
Solyc04g054500.2.1	Tomato	cytosol	62.96	67.11
VIT_07s0031g01160.t01	Wine grape	cytosol	62.35	66.89
Bra011840.1-P	Field mustard	cytosol	63.58	65.19
CDX86196	Canola	cytosol	63.58	65.19
CDY41999	Canola	cytosol	63.58	65.19
CDY42647	Canola	cytosol	63.58	65.19
PGSC0003DMT400056666	Potato	cytosol	61.11	65.13
AT4G39700.1	Thale cress	cytosol	62.35	63.92
Zm00001d032291_P001	Maize	cytosol	56.79	63.89
KRH31264	Soybean	cytosol	60.49	63.23
Solyc05g051820.2.1	Tomato	cytosol	59.26	62.34
PGSC0003DMT400056199	Potato	cytosol	58.64	61.69
KRG97609	Soybean	cytosol	59.26	61.15
Zm00001d004138_P001	Maize	cytosol	53.7	56.13
Zm00001d027720_P001	Maize	cytosol	51.23	53.21
Zm00001d052760_P001	Maize	cytosol	48.15	51.66
Zm00001d034978_P001	Maize	cytosol	46.91	50.33
Zm00001d018075_P001	Maize	mitochondrion	40.12	35.14
Zm00001d051472_P001	Maize	mitochondrion	30.25	32.67
Zm00001d043403_P001	Maize	cytosol	30.86	32.26
Zm00001d027405_P001	Maize	plastid	34.57	28.87
Zm00001d046169_P001	Maize	cytosol	29.63	26.52

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EMBL:BT062419	UniProt:C0P2A0	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	ProteinID:ONM54622.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF165
SUPFAM:SSF55008	UniParc:UPI0001948AC2	EnsemblPlantsGene:Zm00001d020257	EnsemblPlants:Zm00001d020257_P001	EnsemblPlants:Zm00001d020257_T001	SEG:seg

Description

Heavy metal transport/detoxification superfamily protein

Coordinates

chr7:+:102493334..102494600

Molecular Weight (calculated)

17797.5 Da

IEP (calculated)

9.975

GRAVY (calculated)

-0.517

Length

162 amino acids

Sequence
(BLAST)

001: MGGGTLEYLS DLLGGGGGRR RYKKRKQFQT VELKVRMDCD GCEMKVRNAL SSMKGVHSVE INRKQYKVTV QGYVEPHKVV KRVQATGKKA EIWPYVPYSL
101: VAHPYAAPAY DKKAPPGYVR RVDAVMPVSS TYGGPAAAAG PPQEERLATM FSDDNPNACS VM

Best Arabidopsis Sequence Match ( AT4G39700.1 )
(BLAST)

001: MGVGGTLEYI SELIGNGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKIK NSLSSLKGVK TVEINKKQQK VTVSGYADAS KVLKKAKATG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM

Arabidopsis Description

HIPP23Heavy metal-associated isoprenylated plant protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O65657]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.