Factsheet for Zm00001d005656_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96651	Sorghum	cytosol	91.93	91.93
Zm00001d020257_P001	Maize	cytosol	87.58	87.04
HORVU5Hr1G057730.1	Barley	cytosol	78.88	78.88
TraesCS5A01G191400.1	Wheat	cytosol	78.26	78.75
TraesCS5B01G191700.1	Wheat	cytosol	78.26	78.26
TraesCS5D01G199500.1	Wheat	cytosol	77.64	78.12
Os09t0364800-01	Rice	cytosol, nucleus	52.8	75.89
GSMUA_Achr4P01830_001	Banana	cytosol	67.7	73.15
GSMUA_Achr3P07890_001	Banana	cytosol, mitochondrion, plastid	67.08	72.48
GSMUA_Achr3P04460_001	Banana	cytosol	66.46	71.81
KRH43240	Soybean	cytosol	65.22	68.63
KRH59402	Soybean	cytosol	65.22	68.63
Solyc04g054500.2.1	Tomato	cytosol	62.11	65.79
PGSC0003DMT400056666	Potato	cytosol	60.25	63.82
VIT_07s0031g01160.t01	Wine grape	cytosol	59.01	62.91
Zm00001d032291_P001	Maize	cytosol	55.28	61.81
PGSC0003DMT400056199	Potato	cytosol	59.01	61.69
Solyc05g051820.2.1	Tomato	cytosol	59.01	61.69
Bra011840.1-P	Field mustard	cytosol	59.63	60.76
CDY42647	Canola	cytosol	59.63	60.76
CDY41999	Canola	cytosol	59.63	60.76
CDX86196	Canola	cytosol	59.63	60.76
AT4G39700.1	Thale cress	cytosol	58.39	59.49
KRH31264	Soybean	cytosol	56.52	58.71
KRG97609	Soybean	cytosol	56.52	57.96
Zm00001d004138_P001	Maize	cytosol	51.55	53.55
Zm00001d027720_P001	Maize	cytosol	50.31	51.92
Zm00001d052760_P001	Maize	cytosol	46.58	49.67
Zm00001d034978_P001	Maize	cytosol	45.96	49.01
Zm00001d018075_P001	Maize	mitochondrion	38.51	33.51
Zm00001d051472_P001	Maize	mitochondrion	30.43	32.67
Zm00001d043403_P001	Maize	cytosol	31.06	32.26
Zm00001d027405_P001	Maize	plastid	37.89	31.44
Zm00001d046169_P001	Maize	cytosol	31.06	27.62

Protein Annotations

EntrezGene:100382281	Gene3D:3.30.70.100	MapMan:35.1	EMBL:BT063762	UniProt:C0P643	GO:GO:0003674
GO:GO:0005488	GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:IPR006121	ProteinID:ONM21623.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814
PANTHER:PTHR22814:SF165	SUPFAM:SSF55008	UniParc:UPI0001948FAF	EnsemblPlantsGene:Zm00001d005656	EnsemblPlants:Zm00001d005656_P001	EnsemblPlants:Zm00001d005656_T001
SEG:seg	:	:	:	:	:

Description

Heavy metal transport/detoxification superfamily protein

Coordinates

chr2:+:182284237..182285115

Molecular Weight (calculated)

17888.5 Da

IEP (calculated)

9.699

GRAVY (calculated)

-0.536

Length

161 amino acids

Sequence
(BLAST)

001: MGGTLEYLSD LLGGCSSSSR RRYNRRTQFQ TVELKVRMDC DGCEMKVRNA LSRMKGVHSV EIDRKQSKVT VQGYVEPHKV VKRVQATGKK AAEIWPYVPY
101: SLVAHPYAAP AYDRKAPPGY VRRVDAVMPA SSYGGPTAAG PQEERLVNMF SDDNPNACSI M

Best Arabidopsis Sequence Match ( AT4G39700.1 )
(BLAST)

001: MGVGGTLEYI SELIGNGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKIK NSLSSLKGVK TVEINKKQQK VTVSGYADAS KVLKKAKATG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM

Arabidopsis Description

HIPP23Heavy metal-associated isoprenylated plant protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O65657]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.