Factsheet for Zm00001d018075_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30743	Sorghum	plastid	80.0	83.62
TraesCS6D01G282300.1	Wheat	cytosol, mitochondrion	55.14	63.35
TraesCS6B01G332000.2	Wheat	cytosol	55.14	62.96
Zm00001d032291_P001	Maize	cytosol	32.43	41.67
Zm00001d020257_P001	Maize	cytosol	35.14	40.12
Zm00001d004138_P001	Maize	cytosol	32.97	39.35
Zm00001d034978_P001	Maize	cytosol	31.89	39.07
Zm00001d052760_P001	Maize	cytosol	31.89	39.07
Zm00001d005656_P001	Maize	mitochondrion	33.51	38.51
Zm00001d027720_P001	Maize	cytosol	29.19	34.62
Zm00001d051472_P001	Maize	mitochondrion	24.86	30.67
Zm00001d027405_P001	Maize	plastid	28.65	27.32
Zm00001d043403_P001	Maize	cytosol	20.54	24.52
Zm00001d046169_P001	Maize	cytosol	23.78	24.31

Protein Annotations

EnsemblPlants:Zm00001d018075_P001	EnsemblPlants:Zm00001d018075_T001	EnsemblPlantsGene:Zm00001d018075	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF145	PFAM:PF00403	PFscan:PS50846	ProteinID:AQK74972.1
SEG:seg	SUPFAM:SSF55008	UniParc:UPI000221E942	UniProt:A0A1D6HKL9	MapMan:35.2	:

Description

Copper ion binding protein

Coordinates

chr5:+:213815299..213816720

Molecular Weight (calculated)

20431.4 Da

IEP (calculated)

9.721

GRAVY (calculated)

-0.523

Length

185 amino acids

Sequence
(BLAST)

001: MGGAMRQLLR FLGASNGRPR EKKTKRTTLR RRLLVPTVEL RVRMDCERCE REVKKALSGI RGVEHVEVNR PQQKVTVTGE VDPVAVLRRA QSTWKKAEPW
101: RGPGHDQDTA GYYATPAAAA LYGVGPAQLQ AHDGRWADPA AYYYCRYPYP YPAPGLSSAE AAVVVGAEQI SSLFSDDNPN ACSVM

Best Arabidopsis Sequence Match ( AT1G06330.1 )
(BLAST)

001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.