Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G282300.1 | Wheat | cytosol, mitochondrion | 91.36 | 91.93 |
| KXG30743 | Sorghum | plastid | 62.96 | 57.63 |
| Zm00001d018075_P001 | Maize | mitochondrion | 62.96 | 55.14 |
| TraesCS5B01G191700.1 | Wheat | cytosol | 41.98 | 42.24 |
| TraesCS3B01G238100.1 | Wheat | cytosol | 25.93 | 42.0 |
| TraesCS2B01G077100.1 | Wheat | cytosol, plastid | 38.89 | 40.65 |
| TraesCS4B01G105100.1 | Wheat | mitochondrion, plastid | 37.04 | 40.54 |
| TraesCS2B01G186900.1 | Wheat | cytosol | 40.12 | 40.12 |
| TraesCS6B01G059000.1 | Wheat | cytosol | 38.27 | 38.99 |
| TraesCS2B01G304100.1 | Wheat | cytosol | 33.33 | 35.76 |
| TraesCS5B01G242000.1 | Wheat | cytosol | 33.33 | 35.53 |
| TraesCS7B01G285400.1 | Wheat | mitochondrion, plastid | 32.1 | 32.3 |
| TraesCS3B01G329600.1 | Wheat | cytosol | 26.54 | 29.05 |
| TraesCS6B01G287000.1 | Wheat | mitochondrion | 25.31 | 26.97 |
| TraesCS7B01G237800.1 | Wheat | cytosol | 27.16 | 25.88 |
| TraesCS4B01G348900.1 | Wheat | plastid | 29.63 | 24.62 |
| TraesCS1B01G215100.1 | Wheat | cytosol, plastid | 27.16 | 22.34 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 |
| PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF145 | SUPFAM:SSF55008 | EnsemblPlantsGene:TraesCS6B01G332000 | EnsemblPlants:TraesCS6B01G332000.2 |
| TIGR:cd00371 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:583443626..583444491
Molecular Weight (calculated)
17579.9 Da
IEP (calculated)
9.927
GRAVY (calculated)
-0.588
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGIKQLVA SLLGAVGGGQ RCAKESTQPQ PQTVELRVRM DCERCERQVK KALAGIRVAG VERVEVNRKQ QRVTVTGVVD PHKVLRRAQS TGKKAELWPR
101: NHHHPGYDDH SAAVTARYGA IGAAQANDRW APSPYRQNAD AVGAEQITSL FSDENPNACS VM
101: NHHHPGYDDH SAAVTARYGA IGAAQANDRW APSPYRQNAD AVGAEQITSL FSDENPNACS VM
001: MGALNYLSEY FSNHFYVSIR KRKKRKVMQT VNIKVKIDCD GCERKIKNAV SSIKGAKSVE VNRKMHKVTV SGYVDPKKVL KTVQSTGKKK AELWPYVPYT
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM
Arabidopsis Description
HIPP22HIPP22 [Source:UniProtKB/TrEMBL;Acc:A0A178WF89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.