Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G333800.1 | Wheat | cytosol | 93.53 | 92.98 |
| TraesCS7A01G345500.1 | Wheat | cytosol | 88.24 | 91.46 |
| HORVU7Hr1G080490.1 | Barley | cytosol | 89.41 | 87.86 |
| Os06t0542300-01 | Rice | cytosol | 67.06 | 62.3 |
| Zm00001d046169_P001 | Maize | cytosol | 64.12 | 60.22 |
| EER89887 | Sorghum | cytosol | 63.53 | 53.47 |
| TraesCS3B01G329600.1 | Wheat | cytosol | 38.82 | 44.59 |
| CDX94648 | Canola | cytosol | 34.71 | 41.84 |
| CDY57455 | Canola | cytosol | 34.71 | 41.84 |
| AT1G29100.2 | Thale cress | cytosol | 35.88 | 41.5 |
| Bra030119.1-P | Field mustard | cytosol | 34.12 | 41.13 |
| TraesCS6B01G287000.1 | Wheat | mitochondrion | 33.53 | 37.5 |
| TraesCS2B01G077100.1 | Wheat | cytosol, plastid | 28.82 | 31.61 |
| TraesCS3B01G238100.1 | Wheat | cytosol | 17.65 | 30.0 |
| TraesCS7B01G285400.1 | Wheat | mitochondrion, plastid | 27.06 | 28.57 |
| TraesCS6B01G059000.1 | Wheat | cytosol | 26.47 | 28.3 |
| TraesCS4B01G105100.1 | Wheat | mitochondrion, plastid | 24.12 | 27.7 |
| TraesCS5B01G242000.1 | Wheat | cytosol | 24.71 | 27.63 |
| TraesCS5B01G191700.1 | Wheat | cytosol | 25.88 | 27.33 |
| TraesCS6B01G332000.2 | Wheat | cytosol | 25.88 | 27.16 |
| TraesCS2B01G186900.1 | Wheat | cytosol | 24.71 | 25.93 |
| TraesCS2B01G304100.1 | Wheat | cytosol | 22.35 | 25.17 |
| TraesCS4B01G348900.1 | Wheat | plastid | 27.65 | 24.1 |
| TraesCS1B01G215100.1 | Wheat | cytosol, plastid | 27.65 | 23.86 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 |
| PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF138 | SUPFAM:SSF55008 | EnsemblPlantsGene:TraesCS7B01G237800 | EnsemblPlants:TraesCS7B01G237800.1 |
| TIGR:cd00371 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:443171085..443171809
Molecular Weight (calculated)
19043.1 Da
IEP (calculated)
7.722
GRAVY (calculated)
-0.620
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIVEMQMNI DCDGCEDNVR KALLRLQGVH YVDVDRARDK VTVTGTATQK KVLRAARRTG KLVVLWPSAY DPGYHHAYAH AQPAYYSYQA KPASAAHAHR
101: YYNSVPHGRS GYMPAAQYGS ASSYNYHVHG YYDSDLHGYY HEQQALSNAA VPADERSYFS DDNPSACSIM
101: YYNSVPHGRS GYMPAAQYGS ASSYNYHVHG YYDSDLHGYY HEQQALSNAA VPADERSYFS DDNPSACSIM
001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM
Arabidopsis Description
Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.