Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94648 | Canola | cytosol | 76.87 | 80.14 |
| CDY57455 | Canola | cytosol | 76.87 | 80.14 |
| Bra030119.1-P | Field mustard | cytosol | 75.51 | 78.72 |
| AT1G06330.1 | Thale cress | cytosol | 42.18 | 41.33 |
| TraesCS7A01G345500.1 | Wheat | cytosol | 40.82 | 36.59 |
| Zm00001d046169_P001 | Maize | cytosol | 44.22 | 35.91 |
| TraesCS7B01G237800.1 | Wheat | cytosol | 41.5 | 35.88 |
| TraesCS7D01G333800.1 | Wheat | cytosol | 41.5 | 35.67 |
| HORVU7Hr1G080490.1 | Barley | cytosol | 40.14 | 34.1 |
| Os06t0542300-01 | Rice | cytosol | 41.5 | 33.33 |
| EER89887 | Sorghum | cytosol | 44.9 | 32.67 |
| AT3G48970.1 | Thale cress | cytosol | 30.61 | 32.14 |
| AT4G08570.1 | Thale cress | cytosol | 30.61 | 30.0 |
| AT5G66110.1 | Thale cress | cytosol | 29.25 | 29.25 |
| AT1G71050.1 | Thale cress | cytosol, nucleus, plastid | 29.93 | 28.95 |
| AT5G17450.1 | Thale cress | cytosol | 28.57 | 28.19 |
| AT4G39700.1 | Thale cress | cytosol | 29.93 | 27.85 |
| AT3G56891.1 | Thale cress | cytosol | 31.29 | 27.71 |
| AT4G38580.1 | Thale cress | cytosol | 28.57 | 27.45 |
| AT4G35060.1 | Thale cress | cytosol | 28.57 | 27.45 |
| AT2G18196.1 | Thale cress | plastid | 31.97 | 26.4 |
| AT1G22990.1 | Thale cress | cytosol | 26.53 | 25.66 |
| AT4G10465.1 | Thale cress | plastid | 31.29 | 25.14 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | EntrezGene:839785 | UniProt:A0A1P8AR59 | ProteinID:AAF88133.1 | ProteinID:AEE31042.1 |
| ProteinID:ANM59087.1 | ArrayExpress:AT1G29100 | EnsemblPlantsGene:AT1G29100 | RefSeq:AT1G29100 | TAIR:AT1G29100 | RefSeq:AT1G29100-TAIR-G |
| EnsemblPlants:AT1G29100.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0030001 | GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | RefSeq:NP_001321479.1 | RefSeq:NP_174205.1 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 |
| PANTHER:PTHR22814:SF107 | SUPFAM:SSF55008 | UniParc:UPI0008489EB9 | SEG:seg | : | : |
Description
Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G29100]
Coordinates
chr1:+:10168717..10169916
Molecular Weight (calculated)
17123.4 Da
IEP (calculated)
9.285
GRAVY (calculated)
-0.871
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTVVEMEVP MDCPGCENKV RKALEKMNGV HDVQIDIKQQ RVTVTGSAEQ KKVLKVARNV TKRDICLWSY PYHPESNGYN DRYFKKKFRK RINMSVNGEK
101: VSSYNYHKHG YHGHEHGYYQ ERPYSGLINP SASSMFSEEN PHFCSIM
101: VSSYNYHKHG YHGHEHGYYQ ERPYSGLINP SASSMFSEEN PHFCSIM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.