Factsheet for TraesCS2A01G160700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G186900.1	Wheat	cytosol	98.77	98.77
TraesCS2D01G168000.1	Wheat	cytosol	97.53	97.53
EER99736	Sorghum	cytosol	71.6	69.05
Bra011840.1-P	Field mustard	cytosol	62.96	64.56
CDX86196	Canola	cytosol	62.96	64.56
CDY41999	Canola	cytosol	62.96	64.56
CDY42647	Canola	cytosol	62.96	64.56
Os03t0383900-01	Rice	cytosol	62.35	64.33
VIT_07s0031g01160.t01	Wine grape	cytosol	59.88	64.24
AT4G39700.1	Thale cress	cytosol	61.73	63.29
KRH59402	Soybean	cytosol	59.26	62.75
KRH43240	Soybean	cytosol	59.26	62.75
PGSC0003DMT400056666	Potato	cytosol	58.02	61.84
Solyc04g054500.2.1	Tomato	cytosol	57.41	61.18
TraesCS5A01G191400.1	Wheat	cytosol	58.64	59.38
GSMUA_Achr7P11680_001	Banana	cytosol	54.32	59.06
KRH31264	Soybean	cytosol	56.17	58.71
PGSC0003DMT400056199	Potato	cytosol	54.32	57.14
Solyc05g051820.2.1	Tomato	cytosol	53.09	55.84
KRG97609	Soybean	cytosol	53.7	55.41
TraesCS4A01G211400.1	Wheat	mitochondrion, plastid	50.62	55.41
TraesCS2A01G064900.1	Wheat	nucleus	47.53	49.68
TraesCS2A01G287200.1	Wheat	cytosol	46.3	49.67
TraesCS3A01G206100.1	Wheat	cytosol	44.44	47.68
TraesCS5A01G244000.1	Wheat	cytosol	41.36	44.08
TraesCS7A01G382700.1	Wheat	mitochondrion, plastid	42.59	42.86
TraesCS6A01G043000.1	Wheat	cytosol	40.74	41.51
TraesCS6A01G259700.1	Wheat	mitochondrion	29.01	32.87
TraesCS7A01G345500.1	Wheat	cytosol	27.16	26.83
TraesCS5A01G516900.1	Wheat	plastid	32.1	26.67
TraesCS1A01G200700.1	Wheat	cytosol, plastid	31.48	26.15

Protein Annotations

EnsemblPlants:TraesCS2A01G160700.1	EnsemblPlantsGene:TraesCS2A01G160700	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PANTHER:PTHR22814	PANTHER:PTHR22814:SF171	PFAM:PF00403	PFscan:PS50846	SEG:seg	SUPFAM:SSF55008
TIGR:cd00371	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:111455408..111457253

Molecular Weight (calculated)

17555.8 Da

IEP (calculated)

9.989

GRAVY (calculated)

-0.736

Length

162 amino acids

Sequence
(BLAST)

001: MGVGGTLEYL SGLLGGGGGH GHGHGHGNRR RRKQMQTVEL KVSMDCEGCE RKVKNALSSM KGVRSVNINR KQQKVTVAGY ADASKVLRKA QSTGKKAEIW
101: PYVPYSQVSQ PYVAGTYDKR APAGYVRSQE PGYGNVSGQV SRQDDQLTDM FNDDNANSCA VM

Best Arabidopsis Sequence Match ( AT4G39700.1 )
(BLAST)

001: MGVGGTLEYI SELIGNGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKIK NSLSSLKGVK TVEINKKQQK VTVSGYADAS KVLKKAKATG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM

Arabidopsis Description

HIPP23Heavy metal-associated isoprenylated plant protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O65657]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.