Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G105100.1 | Wheat | mitochondrion, plastid | 98.65 | 98.65 |
| TraesCS4D01G102000.1 | Wheat | mitochondrion, plastid | 96.62 | 96.62 |
| HORVU4Hr1G017070.3 | Barley | cytosol | 89.19 | 77.65 |
| Os08t0403300-00 | Rice | cytosol | 76.35 | 75.33 |
| Zm00001d032291_P001 | Maize | cytosol | 70.95 | 72.92 |
| EES13808 | Sorghum | cytosol | 70.95 | 72.41 |
| GSMUA_Achr3P04460_001 | Banana | cytosol | 64.19 | 63.76 |
| GSMUA_Achr3P07890_001 | Banana | cytosol, mitochondrion, plastid | 63.51 | 63.09 |
| TraesCS5A01G191400.1 | Wheat | cytosol | 67.57 | 62.5 |
| GSMUA_Achr4P01830_001 | Banana | cytosol | 62.16 | 61.74 |
| KRH43240 | Soybean | cytosol | 58.11 | 56.21 |
| KRH59402 | Soybean | cytosol | 58.11 | 56.21 |
| VIT_07s0031g01160.t01 | Wine grape | cytosol | 56.08 | 54.97 |
| Solyc04g054500.2.1 | Tomato | cytosol | 54.05 | 52.63 |
| PGSC0003DMT400056199 | Potato | cytosol | 53.38 | 51.3 |
| Solyc05g051820.2.1 | Tomato | cytosol | 53.38 | 51.3 |
| PGSC0003DMT400056666 | Potato | cytosol | 52.03 | 50.66 |
| TraesCS2A01G160700.1 | Wheat | cytosol | 55.41 | 50.62 |
| TraesCS2A01G064900.1 | Wheat | nucleus | 52.03 | 49.68 |
| Bra011840.1-P | Field mustard | cytosol | 52.03 | 48.73 |
| CDX86196 | Canola | cytosol | 52.03 | 48.73 |
| CDY41999 | Canola | cytosol | 52.03 | 48.73 |
| CDY42647 | Canola | cytosol | 52.03 | 48.73 |
| AT4G39700.1 | Thale cress | cytosol | 52.03 | 48.73 |
| KRG97609 | Soybean | cytosol | 51.35 | 48.41 |
| KRH31264 | Soybean | cytosol | 50.68 | 48.39 |
| TraesCS3A01G206100.1 | Wheat | cytosol | 46.62 | 45.7 |
| TraesCS2A01G287200.1 | Wheat | cytosol | 45.95 | 45.03 |
| TraesCS5A01G244000.1 | Wheat | cytosol | 45.95 | 44.74 |
| TraesCS7A01G382700.1 | Wheat | mitochondrion, plastid | 45.95 | 42.24 |
| TraesCS6A01G043000.1 | Wheat | cytosol | 45.27 | 42.14 |
| TraesCS6A01G259700.1 | Wheat | mitochondrion | 31.08 | 32.17 |
| TraesCS5A01G516900.1 | Wheat | plastid | 35.14 | 26.67 |
| TraesCS7A01G345500.1 | Wheat | cytosol | 29.05 | 26.22 |
| TraesCS1A01G200700.1 | Wheat | cytosol, plastid | 32.43 | 24.62 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G211400.1 | EnsemblPlantsGene:TraesCS4A01G211400 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF103 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg | SUPFAM:SSF55008 |
| TIGR:cd00371 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:505495653..505496209
Molecular Weight (calculated)
16719.3 Da
IEP (calculated)
10.620
GRAVY (calculated)
-0.640
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGTLRFLSD VLLGSSSQRR HSKKRRQFNT VELKVKMDCD GCELKIRNTL ANMKGAQSVE INRKQHKVTV KGFVEPQRVL RRVQSTGKRA ELWPYVPYTN
101: PYMPPVYDKR APAGHVRKVE GAMPVSAGQE ERLATLFSDD NPNACSVM
101: PYMPPVYDKR APAGHVRKVE GAMPVSAGQE ERLATLFSDD NPNACSVM
001: MGALNYLSEY FSNHFYVSIR KRKKRKVMQT VNIKVKIDCD GCERKIKNAV SSIKGAKSVE VNRKMHKVTV SGYVDPKKVL KTVQSTGKKK AELWPYVPYT
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM
Arabidopsis Description
HIPP22HIPP22 [Source:UniProtKB/TrEMBL;Acc:A0A178WF89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.