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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011581.1-P Field mustard cytosol 98.04 98.04
CDY52653 Canola cytosol 98.04 98.04
AT4G35060.1 Thale cress cytosol 94.12 94.12
CDY17504 Canola cytosol 93.46 92.86
CDX76309 Canola cytosol 93.46 92.86
KRH60697 Soybean cytosol 75.82 75.32
CDY12089 Canola cytosol 74.51 74.51
CDX90282 Canola cytosol 74.51 74.51
CDY65011 Canola cytosol 72.55 72.55
CDX72748 Canola cytosol 71.9 71.9
PGSC0003DMT400015784 Potato cytosol 69.93 69.93
VIT_03s0038g02440.t01 Wine grape cytosol 70.59 69.68
Solyc01g111600.2.1 Tomato nucleus 69.28 69.28
KRH29001 Soybean cytosol 67.32 66.03
GSMUA_Achr4P25770_001 Banana cytosol, plastid 62.09 61.29
TraesCS2B01G077100.1 Wheat cytosol, plastid 61.44 60.65
TraesCS2D01G063000.1 Wheat cytosol, plastid 61.44 60.65
TraesCS2A01G064900.1 Wheat nucleus 60.13 59.35
GSMUA_Achr1P02370_001 Banana cytosol, plastid 60.13 59.35
EES11880 Sorghum cytosol 58.17 57.42
Os04t0244800-01 Rice plasma membrane 57.52 56.77
Zm00001d004138_P001 Maize cytosol 56.86 56.13
CDY07874 Canola cytosol 52.94 55.86
CDX88005 Canola cytosol 52.94 55.86
KRH24318 Soybean cytosol, nucleus, plastid 31.37 55.81
TraesCS6A01G043000.1 Wheat cytosol 54.25 52.2
TraesCS6B01G059000.1 Wheat cytosol 54.25 52.2
Os03t0156600-01 Rice cytosol 52.29 51.61
TraesCS6D01G049600.1 Wheat cytosol 53.59 51.57
EER92834 Sorghum cytosol 52.29 51.28
HORVU7Hr1G090970.1 Barley mitochondrion 52.94 50.94
TraesCS7B01G285400.1 Wheat mitochondrion, plastid 53.59 50.93
TraesCS7A01G382700.1 Wheat mitochondrion, plastid 52.94 50.31
Zm00001d027720_P001 Maize cytosol 50.98 50.0
TraesCS7D01G379100.1 Wheat mitochondrion, plastid 52.29 49.69
CDX96299 Canola cytosol 47.06 48.0
CDX72773 Canola cytosol 47.06 48.0
CDY12499 Canola cytosol 47.71 47.71
CDY25762 Canola cytosol 47.06 47.06
CDX75144 Canola cytosol 38.56 46.83
EES14354 Sorghum cytosol 45.1 45.7
Os01t0507700-01 Rice plasma membrane 45.1 45.7
TraesCS5D01G250700.1 Wheat cytosol 45.1 45.39
TraesCS5A01G244000.1 Wheat cytosol 45.1 45.39
HORVU5Hr1G069380.2 Barley cytosol 45.1 45.39
CDY21408 Canola cytosol 45.1 45.1
TraesCS5B01G242000.1 Wheat cytosol 44.44 44.74
CDY04750 Canola cytosol 44.44 44.44
TraesCS2D01G285700.1 Wheat cytosol 43.79 44.37
TraesCS2B01G304100.1 Wheat cytosol 43.79 44.37
Zm00001d034978_P001 Maize cytosol 43.79 44.37
TraesCS2A01G287200.1 Wheat cytosol 43.79 44.37
TraesCS3A01G206100.1 Wheat cytosol 43.14 43.71
TraesCS3D01G209500.1 Wheat cytosol 42.48 43.05
Zm00001d052760_P001 Maize cytosol 42.48 43.05
HORVU3Hr1G049780.1 Barley cytosol 42.48 43.05
CDY36193 Canola cytosol 40.52 41.33
TraesCS3B01G238100.1 Wheat cytosol 26.8 41.0
CDX86196 Canola cytosol 41.18 39.87
CDY41999 Canola cytosol 41.18 39.87
CDY42647 Canola cytosol 41.18 39.87
CDX85452 Canola cytosol 37.25 38.26
CDY55938 Canola cytosol 37.25 38.26
CDY38431 Canola cytosol 36.6 37.58
CDY16919 Canola cytosol 35.95 36.91
HORVU6Hr1G009000.1 Barley cytosol, plastid, vacuole 52.94 36.0
CDX94648 Canola cytosol 30.07 32.62
CDY57455 Canola cytosol 30.07 32.62
CDY05886 Canola cytosol 29.41 32.61
CDY08096 Canola cytosol 29.41 32.61
CDY27183 Canola cytosol 31.37 30.38
CDX76017 Canola cytosol 30.72 29.75
CDX72102 Canola cytosol 30.72 29.75
CDY47384 Canola cytosol, extracellular 30.72 29.56
CDY06206 Canola cytosol 28.1 28.48
HORVU2Hr1G011060.1 Barley nucleus, plastid 26.8 26.45
CDX86861 Canola plastid 31.37 26.37
CDX99542 Canola plastid 31.37 26.37
CDY13354 Canola cytosol 27.45 23.6
CDX67533 Canola cytosol 27.45 23.6
CDX85985 Canola mitochondrion 15.69 20.0
CDY09978 Canola cytosol 28.76 15.07
Protein Annotations
EnsemblPlants:CDX69108EnsemblPlantsGene:GSBRNA2T00130892001Gene3D:3.30.70.100GO:A0A078C225GO:GO:0003674GO:GO:0005488
GO:GO:0006810GO:GO:0008150GO:GO:0030001GO:GO:0046872InterPro:HMA_domInterPro:HMA_dom_sf
InterPro:IPR006121PANTHER:PTHR22814PANTHER:PTHR22814:SF155PFAM:PF00403PFscan:PS50846ProteinID:CDX69108
ProteinID:CDX69108.1SUPFAM:SSF55008UniParc:UPI0004EE3E29MapMan:35.1::
Description
BnaC01g03450D
Coordinates
chrLK031789:-:2962966..2963758
Molecular Weight (calculated)
17083.2 Da
IEP (calculated)
7.498
GRAVY (calculated)
-0.382
Length
153 amino acids
Sequence
(BLAST)
001: MGVLDHVSEY FDCSSGDSKR HRSLQTVDVR VLIDCEGCER KVRRALEGMN GVRDVAIEPN AQKVTVVGYV EPNKVVARII HRTGKRAELY PYVPYDVVAH
101: PYASGVYDNR APVGYVRNTE YDPHVSRLAR ASSTEVRYTT AFSDENASGC VVM
Best Arabidopsis Sequence Match ( AT4G35060.1 )
(BLAST)
001: MGVLDHVSEY FDCSHGSSKR HKSLQTVDVR VLIDCEGCER KVRRALEGMR GIRDVTIEPN AQKVTVVGYV EPNKVVARII HRTGKRAELY PFVPYDVVAH
101: PYASGVYDNR APTGYVRNTE YDPHVSRLAR ASSTEVRYTT AFSDENASAC VVM
Arabidopsis Description
HIPP25HIPP25 [Source:UniProtKB/TrEMBL;Acc:A0A178V323]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.