Factsheet for Os01t0507700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0565000-01
Os04t0445600-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66110.1	Os02t0565000-01	AT1G54060.1	21798944
AT5G66110.1	Os04t0445600-00	AT1G54060.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034978_P001	Maize	cytosol	84.77	84.77
EES14354	Sorghum	cytosol	84.11	84.11
TraesCS3A01G206100.1	Wheat	cytosol	82.78	82.78
TraesCS3D01G209500.1	Wheat	cytosol	82.78	82.78
TraesCS2A01G287200.1	Wheat	cytosol	82.12	82.12
TraesCS2B01G304100.1	Wheat	cytosol	82.12	82.12
TraesCS2D01G285700.1	Wheat	cytosol	82.12	82.12
Zm00001d052760_P001	Maize	cytosol	82.12	82.12
HORVU3Hr1G049780.1	Barley	cytosol	81.46	81.46
TraesCS5D01G250700.1	Wheat	cytosol	72.19	71.71
TraesCS5A01G244000.1	Wheat	cytosol	71.52	71.05
TraesCS5B01G242000.1	Wheat	cytosol	70.2	69.74
HORVU5Hr1G069380.2	Barley	cytosol	68.87	68.42
TraesCS3B01G238100.1	Wheat	cytosol	42.38	64.0
Bra009662.1-P	Field mustard	cytosol	43.05	53.72
PGSC0003DMT400015784	Potato	cytosol	53.64	52.94
Solyc01g111600.2.1	Tomato	nucleus	53.64	52.94
AT5G66110.1	Thale cress	cytosol	50.33	51.7
CDY12089	Canola	cytosol	52.32	51.63
CDX90282	Canola	cytosol	52.32	51.63
Bra010738.1-P	Field mustard	cytosol	52.32	51.63
VIT_04s0023g03910.t01	Wine grape	cytosol	41.06	51.24
CDY07874	Canola	cytosol	49.01	51.03
CDX88005	Canola	cytosol	49.01	51.03
CDY65011	Canola	cytosol	51.66	50.98
Bra033570.1-P	Field mustard	cytosol	51.66	50.98
VIT_03s0038g02440.t01	Wine grape	cytosol	52.32	50.97
KRH60697	Soybean	cytosol	51.66	50.65
AT4G38580.1	Thale cress	cytosol	50.99	50.33
Os04t0244800-01	Rice	plasma membrane	51.66	50.32
PGSC0003DMT400009390	Potato	cytosol	52.98	50.31
Solyc02g083550.1.1	Tomato	cytosol	52.98	50.31
CDX72748	Canola	cytosol	50.33	49.67
VIT_04s0023g03890.t01	Wine grape	cytosol	51.66	48.75
KRH29001	Soybean	cytosol	49.01	47.44
Os08t0403300-00	Rice	cytosol	47.02	47.33
KRH24318	Soybean	cytosol, nucleus, plastid	26.49	46.51
Os03t0156600-01	Rice	cytosol	47.02	45.81
Os03t0383900-01	Rice	cytosol	47.02	45.22
CDX69108	Canola	cytosol	45.7	45.1
Os09t0364800-01	Rice	cytosol, nucleus	33.11	44.64
Bra011581.1-P	Field mustard	cytosol	45.03	44.44
CDY52653	Canola	cytosol	45.03	44.44
AT4G35060.1	Thale cress	cytosol	43.71	43.14
CDX76309	Canola	cytosol	43.71	42.86
Bra034669.1-P	Field mustard	cytosol	43.71	42.86
CDY17504	Canola	cytosol	43.05	42.21
KRH28829	Soybean	cytosol	31.79	39.67
Os03t0120400-01	Rice	plastid	37.09	29.02
Os01t0758000-00	Rice	cytosol	29.14	28.76
Os10t0537400-00	Rice	cytosol	33.77	27.57
Os06t0542300-01	Rice	cytosol	23.84	19.67

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EntrezGene:4324048	EMBL:AK060145	ProteinID:BAC06873.1	ProteinID:BAF05068.1
ProteinID:BAS72357.1	ProteinID:EAZ12071.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0030001	GO:GO:0046872	GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	EnsemblPlantsGene:Os01g0507700	EnsemblPlants:Os01t0507700-01	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814
PANTHER:PTHR22814:SF176	UniProt:Q8LJL3	SUPFAM:SSF55008	UniParc:UPI00000A64A6	RefSeq:XP_015622241.1	SEG:seg

Description

Heavy metal transport/detoxification protein domain containing protein. (Os01t0507700-01)

Coordinates

chr1:+:17741064..17742255

Molecular Weight (calculated)

16636.2 Da

IEP (calculated)

9.398

GRAVY (calculated)

-0.354

Length

151 amino acids

Sequence
(BLAST)

001: MGVLDSLSDM CSLTETKEAL KLRKKRPLQT VNIKVKMDCE GCERRVKNAV KSMRGVTSVA VNPKQSRCTV TGYVEASKVL ERVKSTGKAA EMWPYVPYTM
101: TTYPYVGGAY DKKAPAGFVR GNPAAMADPS APEVRYMTMF SDENVDSCSI M

Best Arabidopsis Sequence Match ( AT1G71050.1 )
(BLAST)

001: MGALDSLSEY ISDYFRVTRK RRKRKVMQTV NIKVKMDCDG CERRVKNAVS SMKGVKSVEV NRKIHKVTVS GYVEPKKVLK RIERTGKKAE IWPYVPYNMV
101: AYPYAVGTYD KKAPAGYVRK SEQSQLQLLP GAPENHYISL FSDENPNACT VM

Arabidopsis Description

HIPP20HIPP20 [Source:UniProtKB/TrEMBL;Acc:A0A178W5Y0]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.