Factsheet for GSMUA_Achr10P30480_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P01830_001	Banana	cytosol	76.71	75.17
GSMUA_Achr3P04460_001	Banana	cytosol	71.92	70.47
GSMUA_Achr3P07890_001	Banana	cytosol, mitochondrion, plastid	69.86	68.46
GSMUA_Achr7P11680_001	Banana	cytosol	63.01	61.74
KRH59402	Soybean	cytosol	63.01	60.13
KRH43240	Soybean	cytosol	63.01	60.13
PGSC0003DMT400056666	Potato	cytosol	62.33	59.87
VIT_07s0031g01160.t01	Wine grape	cytosol	61.64	59.6
Solyc04g054500.2.1	Tomato	cytosol	61.64	59.21
KRH31264	Soybean	cytosol	62.33	58.71
Bra011840.1-P	Field mustard	cytosol	62.33	57.59
CDX86196	Canola	cytosol	62.33	57.59
CDY41999	Canola	cytosol	62.33	57.59
CDY42647	Canola	cytosol	62.33	57.59
KRG97609	Soybean	cytosol	61.64	57.32
AT4G39700.1	Thale cress	cytosol	60.96	56.33
PGSC0003DMT400056199	Potato	cytosol	58.9	55.84
Solyc05g051820.2.1	Tomato	cytosol	57.53	54.55
GSMUA_Achr4P25770_001	Banana	cytosol, plastid	52.74	49.68
GSMUA_Achr2P07910_001	Banana	cytosol	51.37	49.67
GSMUA_Achr1P12840_001	Banana	cytosol	51.37	49.67
GSMUA_Achr1P02370_001	Banana	cytosol, plastid	52.05	49.03
GSMUA_Achr3P27280_001	Banana	cytosol	36.3	38.41
GSMUA_Achr10P...	Banana	cytosol	36.99	38.3
GSMUA_Achr11P...	Banana	cytosol	34.25	37.88
GSMUA_Achr2P10210_001	Banana	cytosol	38.36	37.84
GSMUA_Achr3P15460_001	Banana	cytosol	34.93	37.23
GSMUA_Achr7P13900_001	Banana	cytosol	35.62	35.37
GSMUA_Achr6P14470_001	Banana	cytosol	32.19	32.64
GSMUA_Achr11P...	Banana	cytosol	37.67	29.73
GSMUA_Achr2P10220_001	Banana	mitochondrion, plastid	36.3	27.75
GSMUA_Achr1P00790_001	Banana	cytosol	36.99	27.55

Protein Annotations

EnsemblPlants:GSMUA_Achr10P30480_001	EnsemblPlants:GSMUA_Achr10T30480_001	EnsemblPlantsGene:GSMUA_Achr10G30480_001	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF171	PFAM:PF00403	PFscan:PS50846	SUPFAM:SSF55008
UniParc:UPI0002948744	UniProt:M0RMS2	MapMan:35.1	:	:	:

Description

heavy metal-associated domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G30480_001]

Coordinates

chr10:-:32668788..32669307

Molecular Weight (calculated)

16439.8 Da

IEP (calculated)

8.953

GRAVY (calculated)

-0.434

Length

146 amino acids

Sequence
(BLAST)

001: MGDYICGFLC GGHQYANRKQ LQTVELKVRM DCEGCELKVR NAISSVTGVQ SVDINRKQNK VTVTGYVEQH KVLKKVRSTG KRVEIWPYVP YNLVTHPHGA
101: QIYDKKAPPG YVRNVEVVTV SSQPLRQDDL LTNLFSDDNP NACSIM

Best Arabidopsis Sequence Match ( AT4G39700.1 )
(BLAST)

001: MGVGGTLEYI SELIGNGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKIK NSLSSLKGVK TVEINKKQQK VTVSGYADAS KVLKKAKATG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM

Arabidopsis Description

HIPP23Heavy metal-associated isoprenylated plant protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O65657]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.