Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- mitochondrion 4
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_Achr6P02700_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G18196.1 | GSMUA_Achr10P... | AT5G15210.1 | 18974936 |
| AT2G18196.1 | GSMUA_Achr6P02700_001 | AT5G15210.1 | 18974936 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 59.16 | 85.61 |
| GSMUA_Achr1P00790_001 | Banana | cytosol | 75.92 | 73.98 |
| VIT_02s0025g03010.t01 | Wine grape | cytosol, mitochondrion | 54.45 | 73.24 |
| GSMUA_Achr11P... | Banana | cytosol | 70.68 | 72.97 |
| PGSC0003DMT400079287 | Potato | cytosol | 34.03 | 67.01 |
| Os03t0120400-01 | Rice | plastid | 67.02 | 66.32 |
| EER92967 | Sorghum | plastid | 61.78 | 60.82 |
| TraesCS5A01G516900.1 | Wheat | plastid | 61.78 | 60.51 |
| TraesCS4D01G343300.1 | Wheat | plastid | 61.78 | 60.51 |
| TraesCS4B01G348900.1 | Wheat | plastid | 61.26 | 60.0 |
| KRH34236 | Soybean | cytosol | 54.97 | 58.99 |
| Zm00001d027405_P001 | Maize | plastid | 59.69 | 58.76 |
| KRG92555 | Soybean | cytosol | 54.45 | 58.43 |
| Solyc08g075880.2.1 | Tomato | endoplasmic reticulum, plastid | 53.4 | 56.98 |
| CDY13354 | Canola | cytosol | 52.88 | 56.74 |
| CDX67533 | Canola | cytosol | 52.88 | 56.74 |
| Bra028528.1-P | Field mustard | cytosol | 52.88 | 56.74 |
| PGSC0003DMT400079324 | Potato | endoplasmic reticulum | 52.88 | 56.11 |
| AT2G18196.1 | Thale cress | plastid | 51.83 | 55.62 |
| CDX99542 | Canola | plastid | 52.88 | 55.49 |
| CDX86861 | Canola | plastid | 52.88 | 55.49 |
| PGSC0003DMT400012844 | Potato | plastid | 53.4 | 55.43 |
| AT4G10465.1 | Thale cress | plastid | 52.88 | 55.19 |
| Bra037919.1-P | Field mustard | plastid | 52.36 | 54.95 |
| Os10t0537400-00 | Rice | cytosol | 49.74 | 51.35 |
| CDX85985 | Canola | mitochondrion | 31.94 | 50.83 |
| TraesCS1B01G215100.1 | Wheat | cytosol, plastid | 47.12 | 45.69 |
| TraesCS1A01G200700.1 | Wheat | cytosol, plastid | 46.6 | 45.64 |
| GSMUA_Achr2P10210_001 | Banana | cytosol | 35.08 | 45.27 |
| TraesCS1D01G204100.1 | Wheat | cytosol, plastid | 46.6 | 45.18 |
| KXG39011 | Sorghum | cytosol | 48.17 | 44.23 |
| GSMUA_Achr4P01830_001 | Banana | cytosol | 31.94 | 40.94 |
| HORVU4Hr1G085090.2 | Barley | plastid | 61.26 | 40.91 |
| GSMUA_Achr3P04460_001 | Banana | cytosol | 30.37 | 38.93 |
| GSMUA_Achr3P07890_001 | Banana | cytosol, mitochondrion, plastid | 30.37 | 38.93 |
| GSMUA_Achr10P... | Banana | cytosol | 28.27 | 38.3 |
| GSMUA_Achr3P15460_001 | Banana | cytosol | 27.23 | 37.96 |
| GSMUA_Achr2P07910_001 | Banana | cytosol | 29.84 | 37.75 |
| GSMUA_Achr1P12840_001 | Banana | cytosol | 29.32 | 37.09 |
| GSMUA_Achr10P... | Banana | cytosol | 27.75 | 36.3 |
| GSMUA_Achr7P11680_001 | Banana | cytosol | 28.27 | 36.24 |
| GSMUA_Achr6P14470_001 | Banana | cytosol | 26.7 | 35.42 |
| GSMUA_Achr7P13900_001 | Banana | cytosol | 27.23 | 35.37 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 27.75 | 34.19 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 27.75 | 34.19 |
| GSMUA_Achr3P27280_001 | Banana | cytosol | 20.94 | 28.99 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P10220_001 | EnsemblPlants:GSMUA_Achr2T10220_001 | EnsemblPlantsGene:GSMUA_Achr2G10220_001 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF280 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg |
| SUPFAM:SSF55008 | UniParc:UPI000296C016 | UniProt:M0S6R3 | MapMan:35.1 | : | : |
Description
Putative Copper transport protein ATOX1 homolog [Source:GMGC_GENE;Acc:GSMUA_Achr2G10220_001]
Coordinates
chr2:-:13395271..13396249
Molecular Weight (calculated)
22125.9 Da
IEP (calculated)
7.177
GRAVY (calculated)
-0.749
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVLSSLLS TIFSGGDGHR SYNYRSYFYN TSNSSSNTHY HTEDNNMINM RITKGRPLSL QTVELKVRMC CTGCERIVKH ALQKLRGIDS VEVDLDLEKV
101: TVMGYVDRNK VLKEVRRSGK KAEFWPNPDL PLYFTSQKDY FYDEESFRDS YNYWRHGYNG DNHGHIPVPQ RGEDPISNLF NDDDVNACSV M
101: TVMGYVDRNK VLKEVRRSGK KAEFWPNPDL PLYFTSQKDY FYDEESFRDS YNYWRHGYNG DNHGHIPVPQ RGEDPISNLF NDDDVNACSV M
001: MSSLIVKSLG SIVSIIARIF FFRRSRPVSN PRTTAHISYF RMSRKRPLSL QTVELKVRMC CTGCVRIVRN AISKLRGVDS VEVDKELGRV RVVGYVDRNK
101: VLKAVRRAGK RAEFSPYPEP PLYFTSTQNY FVDPSKEFKE SYNYYRHGYN GTEQHGNIPV GSRGDDRVSN MFNDDNVNAC RLM
101: VLKAVRRAGK RAEFSPYPEP PLYFTSTQNY FVDPSKEFKE SYNYYRHGYN GTEQHGNIPV GSRGDDRVSN MFNDDNVNAC RLM
Arabidopsis Description
HIPP44Heavy metal-associated isoprenylated plant protein 44 [Source:UniProtKB/Swiss-Prot;Acc:F4JMB8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.