Factsheet for Bra037919.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86861	Canola	plastid	99.45	99.45
CDX99542	Canola	plastid	99.45	99.45
AT4G10465.1	Thale cress	plastid	89.01	88.52
CDX85985	Canola	mitochondrion	53.85	81.67
VIT_02s0025g03010.t01	Wine grape	cytosol, mitochondrion	57.69	73.94
PGSC0003DMT400079287	Potato	cytosol	36.81	69.07
GSMUA_Achr11P...	Banana	cytosol	47.8	65.91
KRG92555	Soybean	cytosol	63.74	65.17
KRH34236	Soybean	cytosol	63.19	64.61
Bra028528.1-P	Field mustard	cytosol	60.99	62.36
Solyc08g075880.2.1	Tomato	endoplasmic reticulum, plastid	58.24	59.22
PGSC0003DMT400079324	Potato	endoplasmic reticulum	58.24	58.89
GSMUA_Achr11P...	Banana	cytosol	56.04	55.14
Os03t0120400-01	Rice	plastid	56.04	52.85
GSMUA_Achr1P00790_001	Banana	cytosol	56.59	52.55
GSMUA_Achr2P10220_001	Banana	mitochondrion, plastid	54.95	52.36
TraesCS4D01G343300.1	Wheat	plastid	54.95	51.28
TraesCS4B01G348900.1	Wheat	plastid	54.95	51.28
TraesCS5A01G516900.1	Wheat	plastid	54.95	51.28
EER92967	Sorghum	plastid	53.85	50.52
Zm00001d027405_P001	Maize	plastid	51.65	48.45
Os10t0537400-00	Rice	cytosol	45.6	44.86
TraesCS1A01G200700.1	Wheat	cytosol, plastid	42.86	40.0
TraesCS1B01G215100.1	Wheat	cytosol, plastid	42.86	39.59
Bra023619.1-P	Field mustard	cytosol	31.87	38.93
TraesCS1D01G204100.1	Wheat	cytosol, plastid	41.76	38.58
KXG39011	Sorghum	cytosol	43.41	37.98
Bra013976.1-P	Field mustard	cytosol	30.22	36.91
Bra007280.1-P	Field mustard	cytosol	31.87	36.71
Bra016162.1-P	Field mustard	cytosol	30.22	36.67
Bra018022.1-P	Field mustard	cytosol	27.47	36.23
Bra014664.1-P	Field mustard	cytosol	26.37	35.56
HORVU4Hr1G085090.2	Barley	plastid	55.49	35.31
Bra012353.1-P	Field mustard	cytosol	29.12	34.87
Bra024556.1-P	Field mustard	cytosol	28.02	34.69
Bra011840.1-P	Field mustard	cytosol	29.67	34.18
Bra033570.1-P	Field mustard	cytosol	27.47	32.68
Bra010738.1-P	Field mustard	cytosol	27.47	32.68
Bra032428.1-P	Field mustard	cytosol	27.47	32.05
Bra011581.1-P	Field mustard	cytosol	26.37	31.37
Bra009662.1-P	Field mustard	cytosol	20.33	30.58
Bra030119.1-P	Field mustard	cytosol	23.63	30.5
Bra037865.1-P	Field mustard	cytosol	24.73	30.0
Bra034669.1-P	Field mustard	cytosol	24.73	29.22

Protein Annotations

EnsemblPlants:Bra037919.1	EnsemblPlants:Bra037919.1-P	EnsemblPlantsGene:Bra037919	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF280	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	UniParc:UPI0002542425	UniProt:M4FA05	MapMan:35.1	:	:

Description

AT4G10465 (E=2e-081) | metal ion binding

Coordinates

chrA09:+:11670527..11671956

Molecular Weight (calculated)

20982.2 Da

IEP (calculated)

10.627

GRAVY (calculated)

-0.560

Length

182 amino acids

Sequence
(BLAST)

001: MSTFIAKSLG SIVSIVARFF SFRRRPKSNT RPTTHISYFR MSKKRPLSLQ TVDLKVRMCC TGCVRIVRKA ISKLRGVDSV EVEREMGRVR VVGYVDRNKV
101: LKAVRRAGKR AEFWPYPEPP LYFTSTQNYF VDPSKEFKES YNYYRHGYNG TEQHGNIPAG SRGDDRVSNM FNDDNVNACS VM

Best Arabidopsis Sequence Match ( AT4G10465.1 )
(BLAST)

001: MSSLIVKSLG SIVSIIARIF FFRRSRPVSN PRTTAHISYF RMSRKRPLSL QTVELKVRMC CTGCVRIVRN AISKLRGVDS VEVDKELGRV RVVGYVDRNK
101: VLKAVRRAGK RAEFSPYPEP PLYFTSTQNY FVDPSKEFKE SYNYYRHGYN GTEQHGNIPV GSRGDDRVSN MFNDDNVNAC RLM

Arabidopsis Description

HIPP44Heavy metal-associated isoprenylated plant protein 44 [Source:UniProtKB/Swiss-Prot;Acc:F4JMB8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.