Factsheet for Bra018022.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05886	Canola	cytosol	100.0	100.0
CDY08096	Canola	cytosol	100.0	100.0
AT3G48970.1	Thale cress	cytosol	97.1	95.71
KRH38480	Soybean	cytosol	66.67	77.31
KRH09015	Soybean	cytosol	76.81	76.81
PGSC0003DMT400037204	Potato	cytosol	71.74	71.22
Solyc03g025790.2.1	Tomato	cytosol	71.01	70.5
GSMUA_Achr3P27280_001	Banana	cytosol	59.42	59.42
VIT_16s0050g00150.t01	Wine grape	mitochondrion, plastid	70.29	56.4
Bra009662.1-P	Field mustard	cytosol	31.88	36.36
Bra016162.1-P	Field mustard	cytosol	39.13	36.0
Bra011840.1-P	Field mustard	cytosol	39.13	34.18
Bra032428.1-P	Field mustard	cytosol	38.41	33.97
Bra012353.1-P	Field mustard	cytosol	36.96	33.55
Bra024556.1-P	Field mustard	cytosol	35.51	33.33
Bra013976.1-P	Field mustard	cytosol	35.51	32.89
Bra037865.1-P	Field mustard	cytosol	35.51	32.67
Bra030119.1-P	Field mustard	cytosol	33.33	32.62
Bra014664.1-P	Field mustard	cytosol	31.16	31.85
Bra010738.1-P	Field mustard	cytosol	34.06	30.72
Bra023619.1-P	Field mustard	cytosol	32.61	30.2
Bra033570.1-P	Field mustard	cytosol	33.33	30.07
Bra011581.1-P	Field mustard	cytosol	33.33	30.07
Bra007280.1-P	Field mustard	cytosol	34.06	29.75
Bra034669.1-P	Field mustard	cytosol	32.61	29.22
Bra028528.1-P	Field mustard	cytosol	36.23	28.09
Bra037919.1-P	Field mustard	plastid	36.23	27.47

Protein Annotations

EnsemblPlants:Bra018022.1	EnsemblPlants:Bra018022.1-P	EnsemblPlantsGene:Bra018022	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF140	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	UniParc:UPI000253F23B	UniProt:M4DND5	MapMan:35.1	:	:

Description

AT3G48970 (E=9e-061) | copper-binding family protein

Coordinates

chrA06:+:9559203..9559911

Molecular Weight (calculated)

15460.4 Da

IEP (calculated)

8.080

GRAVY (calculated)

-0.413

Length

138 amino acids

Sequence
(BLAST)

001: MTVEIRVPNL DCEGCASKLK KTLLKLKGVE EVEVEMESQK VTARGYRLEE KKVLKAVRRA GKAAEPWPYR LGNSHFASFY KYPSYVTNHY YSDAHRTDPT
101: GGVHTFFHTP AVYSVAVAGD EIAASMFSDD NPHACTIM

Best Arabidopsis Sequence Match ( AT3G48970.3 )
(BLAST)

001: MTVEIRVPNL DCEGCASKLR KTLLKLKGVE EVEVEMETQK VTARGYRLEE KKVLKAVRRA GKAAELWPYR LGNSHFASFY KYPSYVTNHY YSDAHRTDPT
101: GGVHTFFHTP ADYSVAVAGD EIAASMFSDD NPHACTIM

Arabidopsis Description

HIPP31Heavy metal-associated isoprenylated plant protein 31 [Source:UniProtKB/Swiss-Prot;Acc:Q84K70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.