Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25762 | Canola | cytosol | 98.03 | 97.39 |
| CDY12499 | Canola | cytosol | 98.03 | 97.39 |
| Bra024556.1-P | Field mustard | cytosol | 89.47 | 92.52 |
| AT1G22990.1 | Thale cress | cytosol | 92.11 | 92.11 |
| Bra016162.1-P | Field mustard | cytosol | 75.0 | 76.0 |
| Bra013976.1-P | Field mustard | cytosol | 54.61 | 55.7 |
| Bra023619.1-P | Field mustard | cytosol | 53.95 | 55.03 |
| Bra033570.1-P | Field mustard | cytosol | 52.63 | 52.29 |
| Bra009662.1-P | Field mustard | cytosol | 41.45 | 52.07 |
| Bra010738.1-P | Field mustard | cytosol | 51.97 | 51.63 |
| Bra011840.1-P | Field mustard | cytosol | 53.29 | 51.27 |
| Bra037865.1-P | Field mustard | cytosol | 50.0 | 50.67 |
| Bra011581.1-P | Field mustard | cytosol | 48.03 | 47.71 |
| Bra034669.1-P | Field mustard | cytosol | 47.37 | 46.75 |
| Bra018022.1-P | Field mustard | cytosol | 33.55 | 36.96 |
| Bra014664.1-P | Field mustard | cytosol | 28.29 | 31.85 |
| Bra032428.1-P | Field mustard | cytosol | 32.24 | 31.41 |
| Bra007280.1-P | Field mustard | cytosol | 32.24 | 31.01 |
| Bra037919.1-P | Field mustard | plastid | 34.87 | 29.12 |
| Bra030119.1-P | Field mustard | cytosol | 26.97 | 29.08 |
| Bra028528.1-P | Field mustard | cytosol | 32.89 | 28.09 |
Protein Annotations
| EnsemblPlants:Bra012353.1 | EnsemblPlants:Bra012353.1-P | EnsemblPlantsGene:Bra012353 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF176 | PFAM:PF00403 | PFscan:PS50846 | SUPFAM:SSF55008 |
| UniParc:UPI000254141D | UniProt:M4D793 | MapMan:35.1 | : | : | : |
Description
AT1G22990 (E=3e-077) | heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related
Coordinates
chrA07:-:8284447..8285203
Molecular Weight (calculated)
17050.8 Da
IEP (calculated)
10.275
GRAVY (calculated)
-0.489
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MGALDFLFDY FSNSFDVSIR KRKKHKVMQT VNIKVKIDCD GCERKIKNAV SSMKGAKSVE VNRKMHKVTV SGYVDPKKVL KRVQSTGKKK AELWPYVPYT
101: MVAYPYAAGA YDKRAPAGFV RKSEQAQAQP GGTDDKLMSL FSDENPNACI VM
101: MVAYPYAAGA YDKRAPAGFV RKSEQAQAQP GGTDDKLMSL FSDENPNACI VM
001: MGALNYLSEY FSNHFYVSIR KRKKRKVMQT VNIKVKIDCD GCERKIKNAV SSIKGAKSVE VNRKMHKVTV SGYVDPKKVL KTVQSTGKKK AELWPYVPYT
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM
Arabidopsis Description
HIPP22HIPP22 [Source:UniProtKB/TrEMBL;Acc:A0A178WF89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.