Factsheet for Bra007280.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27183	Canola	cytosol	98.73	98.73
Bra014664.1-P	Field mustard	cytosol	68.99	80.74
AT3G56891.1	Thale cress	cytosol	81.01	77.11
VIT_08s0040g00130.t01	Wine grape	cytosol	43.67	55.2
GSMUA_Achr2P10210_001	Banana	cytosol	49.37	52.7
KRH57823	Soybean	cytosol	48.73	52.03
Zm00001d051472_P001	Maize	mitochondrion	48.73	51.33
TraesCS6D01G240700.1	Wheat	mitochondrion	48.1	50.67
TraesCS6A01G259700.1	Wheat	mitochondrion	45.57	50.35
TraesCS6B01G287000.1	Wheat	mitochondrion	46.2	48.03
OQU85626	Sorghum	mitochondrion	48.73	46.67
HORVU6Hr1G066220.1	Barley	cytosol	43.04	36.76
Bra013976.1-P	Field mustard	cytosol	34.18	36.24
Bra016162.1-P	Field mustard	cytosol	34.18	36.0
Bra032428.1-P	Field mustard	cytosol	35.44	35.9
Bra009662.1-P	Field mustard	cytosol	27.22	35.54
Bra023619.1-P	Field mustard	cytosol	32.28	34.23
Bra011840.1-P	Field mustard	cytosol	34.18	34.18
Bra018022.1-P	Field mustard	cytosol	29.75	34.06
Bra030119.1-P	Field mustard	cytosol	30.38	34.04
Bra012353.1-P	Field mustard	cytosol	31.01	32.24
Bra033570.1-P	Field mustard	cytosol	31.01	32.03
Bra010738.1-P	Field mustard	cytosol	31.01	32.03
Bra024556.1-P	Field mustard	cytosol	29.75	31.97
Bra037919.1-P	Field mustard	plastid	36.71	31.87
Bra011581.1-P	Field mustard	cytosol	30.38	31.37
Bra034669.1-P	Field mustard	cytosol	29.75	30.52
Bra028528.1-P	Field mustard	cytosol	34.18	30.34
Bra037865.1-P	Field mustard	cytosol	27.22	28.67

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EnsemblPlantsGene:Bra007280	EnsemblPlants:Bra007280.1	EnsemblPlants:Bra007280.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	UniProt:M4CST8	PFAM:PF00403	ScanProsite:PS01047
PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF85	SUPFAM:SSF55008	SignalP:SignalP-noTM	UniParc:UPI0002542C14
SEG:seg	:	:	:	:	:

Description

AT3G56891 (E=2e-053) | metal ion binding

Coordinates

chrA09:-:28340738..28341585

Molecular Weight (calculated)

18209.3 Da

IEP (calculated)

4.567

GRAVY (calculated)

-0.540

Length

158 amino acids

Sequence
(BLAST)

001: MLDWIHGNYR LPLALSVVEL LVDMDCQGCE KKVRRAISKL DGVDTVEIDV DQQKVTVTGY VDREDVLSMV KRTGRAAEFW PFPYNGYYGD YYTYPSQYLE
101: QPIQKINHAE NTISYNGKYD SYDESTITGY NYPRPTQKVD ENALHLFSDD NVHACAVM

Best Arabidopsis Sequence Match ( AT3G56891.1 )
(BLAST)

001: MFDWIHGNSR LPIALSIVEL LVDMDCKGCE KKVRRAISKL DGVDTVEIDV DRQKVTVTGY VDREEVLKMV KRTGRTAEYW PFPYNGYYGD YYTYPSQHLE
101: QSDQKIYQTI SYSGKYDFYD VDDFQNTNNS TINGYYPSSS QKVQPNIDEN ALHLFSDDNA HACTIM

Arabidopsis Description

HIPP45Heavy metal-associated isoprenylated plant protein 45 [Source:UniProtKB/Swiss-Prot;Acc:B3H6D0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.