CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25186	Canola	plastid	94.52	80.23
CDY41253	Canola	plastid	91.78	77.91
CDY31997	Canola	plastid	97.26	33.81
CDX67633	Canola	plastid	95.89	33.18
AT3G56110.1	Thale cress	plastid	91.78	32.06
CDY27245	Canola	plastid	89.04	32.02
CDX72173	Canola	plastid	86.3	31.03
CDY61529	Canola	plastid	52.05	30.16
CDX74794	Canola	plastid	78.08	26.76
CDY18870	Canola	plastid	73.97	25.84
KRH73238	Soybean	plastid	61.64	20.93
KRH14895	Soybean	plastid	60.27	20.47
CDX70153	Canola	plastid	60.27	20.47
PGSC0003DMT400061546	Potato	plastid	60.27	20.18
Solyc06g050570.1.1	Tomato	plastid	60.27	20.18
CDY07736	Canola	plastid	60.27	19.82
CDY63156	Canola	plastid	58.9	19.72
CDX80758	Canola	plastid	46.58	15.89
CDX97509	Canola	plasma membrane	36.99	14.92
CDY23634	Canola	plasma membrane	36.99	14.92
CDY58876	Canola	plastid	42.47	14.22
CDX81033	Canola	plastid	42.47	14.22
CDY33064	Canola	cytosol, plasma membrane, plastid	35.62	13.9
CDY24050	Canola	cytosol, plasma membrane, plastid	35.62	13.9
CDY51735	Canola	plasma membrane	34.25	13.74
CDY37483	Canola	plasma membrane	34.25	13.74
CDY32804	Canola	plastid	31.51	12.23
CDY26125	Canola	cytosol, plasma membrane, plastid	30.14	11.64
CDY08228	Canola	plasma membrane	30.14	11.64
CDY51077	Canola	cytosol, endoplasmic reticulum, plasma membrane	28.77	11.35
CDY06788	Canola	plastid	30.14	11.34
CDY50022	Canola	cytosol, endoplasmic reticulum, plasma membrane	28.77	11.29
CDY17405	Canola	plastid	28.77	10.94
CDY43514	Canola	mitochondrion	26.03	10.86
CDX81845	Canola	plasma membrane	26.03	10.5
CDY26225	Canola	plasma membrane	26.03	10.33
CDY37482	Canola	plastid	27.4	9.57
CDY59501	Canola	plasma membrane	23.29	9.24
CDX93539	Canola	plastid	26.03	9.13
CDY51734	Canola	plastid	26.03	9.09
CDY51733	Canola	plastid	26.03	8.88
CDX95035	Canola	plastid	24.66	8.65
CDY55133	Canola	plasma membrane	24.66	8.45
CDX86646	Canola	plasma membrane	19.18	7.87
CDY54457	Canola	endoplasmic reticulum, peroxisome, plasma membrane	19.18	7.69
CDY15494	Canola	plasma membrane	17.81	7.3
KRH54835	Soybean	endoplasmic reticulum, extracellular, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:CDY05662	EnsemblPlantsGene:GSBRNA2T00120652001	PANTHER:PTHR19317	PANTHER:PTHR19317:SF34	ProteinID:CDY05662	ProteinID:CDY05662.1
UniParc:UPI0004EF3E3C	MapMan:35.1	:	:	:	:

Description

BnaC02g38750D

Coordinates

chrLK031963:+:640684..641101

Molecular Weight (calculated)

8260.0 Da

IEP (calculated)

11.821

GRAVY (calculated)

-0.245

Length

73 amino acids

Sequence
(BLAST)

1: MSTPPPLPVT NQQAVQSQPP INTPAFRTFF SRLSTSIRDG LSQRRPWAEL VTDALSRIRK NLAYFKVNYV AVI

Best Arabidopsis Sequence Match ( AT3G56110.1 )
(BLAST)

001: MATPPTLPVT NQQAVQSQPP INTPAFRTFF SRLSTSIRDG LSQRRPWTEL IDRSSMARPE SLTDALSRIR KNLAYFKVNY VAIVSLVLAF SLFSHPLSLL
101: VLIGLLGGWM FLYLFRPSDQ PLVVFGRTFS DRETLLALVL STIVVVFMTS VGSLLTSALM IGVAIVCVHG AFVVPDDLFL DEQEPANAGL LSFLGGSATS
201: AAAAVSGRV

Arabidopsis Description

PRA1B1PRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.