Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50022 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 96.76 | 96.24 |
| AT1G55640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 68.65 | 67.91 |
| CDY32804 | Canola | plastid | 41.62 | 40.96 |
| CDY17405 | Canola | plastid | 41.08 | 39.58 |
| PGSC0003DMT400056954 | Potato | plasma membrane | 38.38 | 37.97 |
| Solyc07g066190.1.1 | Tomato | plasma membrane, plastid | 39.46 | 37.82 |
| CDY23634 | Canola | plasma membrane | 31.89 | 32.6 |
| CDY33064 | Canola | cytosol, plasma membrane, plastid | 32.43 | 32.09 |
| CDY51735 | Canola | plasma membrane | 31.35 | 31.87 |
| CDY26125 | Canola | cytosol, plasma membrane, plastid | 32.43 | 31.75 |
| CDY24050 | Canola | cytosol, plasma membrane, plastid | 31.89 | 31.55 |
| CDY37483 | Canola | plasma membrane | 30.81 | 31.32 |
| CDY08228 | Canola | plasma membrane | 31.89 | 31.22 |
| CDX97509 | Canola | plasma membrane | 30.27 | 30.94 |
| CDY43514 | Canola | mitochondrion | 29.19 | 30.86 |
| CDY06788 | Canola | plastid | 31.89 | 30.41 |
| CDX86646 | Canola | plasma membrane | 28.11 | 29.21 |
| CDY41253 | Canola | plastid | 13.51 | 29.07 |
| CDY25186 | Canola | plastid | 13.51 | 29.07 |
| CDY05662 | Canola | plastid | 11.35 | 28.77 |
| CDX81845 | Canola | plasma membrane | 28.11 | 28.73 |
| CDY15494 | Canola | plasma membrane | 27.57 | 28.65 |
| CDY59501 | Canola | plasma membrane | 28.11 | 28.26 |
| CDY26225 | Canola | plasma membrane | 27.57 | 27.72 |
| CDY63156 | Canola | plastid | 31.35 | 26.61 |
| CDY18870 | Canola | plastid | 29.73 | 26.32 |
| CDX74794 | Canola | plastid | 30.27 | 26.29 |
| CDY61529 | Canola | plastid | 17.84 | 26.19 |
| CDY07736 | Canola | plastid | 31.35 | 26.13 |
| CDY27245 | Canola | plastid | 28.65 | 26.11 |
| CDX72173 | Canola | plastid | 28.65 | 26.11 |
| CDY31997 | Canola | plastid | 29.19 | 25.71 |
| CDX81033 | Canola | plastid | 30.27 | 25.69 |
| CDY58876 | Canola | plastid | 30.27 | 25.69 |
| CDX67633 | Canola | plastid | 29.19 | 25.59 |
| CDY54457 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 24.32 | 24.73 |
| CDX70153 | Canola | plastid | 28.65 | 24.65 |
| CDX80758 | Canola | plastid | 28.11 | 24.3 |
| CDX93539 | Canola | plastid | 27.03 | 24.04 |
| CDX95035 | Canola | plastid | 26.49 | 23.56 |
| CDY55133 | Canola | plasma membrane | 24.86 | 21.6 |
| CDY51733 | Canola | plastid | 24.86 | 21.5 |
| CDY37482 | Canola | plastid | 23.24 | 20.57 |
| CDY51734 | Canola | plastid | 21.62 | 19.14 |
Protein Annotations
| EnsemblPlants:CDY51077 | EnsemblPlantsGene:GSBRNA2T00098129001 | GO:A0A078IMB9 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF11 | PFAM:PF03208 | ProteinID:CDY51077 | ProteinID:CDY51077.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EF33D7 | UniProt:A0A078IMB9 | MapMan:22.8.4.3.2 | : |
Description
BnaC06g07460DPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMB9]
Coordinates
chrLK032962:-:66774..67331
Molecular Weight (calculated)
20671.4 Da
IEP (calculated)
6.381
GRAVY (calculated)
0.706
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPPENLPIT AEERHHSFGE VISLSVQNLI AFVSSQRPWL EFLALGSMDL PTSFSSAVSR SKVNLRHFVV NYSLMTAASI TLFLVSNPTA LVTVATFAIL
101: WLLLCFCRDH PLVLYGRQVS DKVIFFGLIV GSFWGLWLTH CFLSLVLGVL TGVLLCLVHA VLRNPDDLFV QEEEVVVPSN FLHWS
101: WLLLCFCRDH PLVLYGRQVS DKVIFFGLIV GSFWGLWLTH CFLSLVLGVL TGVLLCLVHA VLRNPDDLFV QEEEVVVPSN FLHWS
001: MLAPGESVLI PAEEISLSAG DVISLSVHNL IASVSSYRPW WSEFLAFGSI DRPSSFSPAV SRVKLNLHHF AVNYVLLTAA SITLFLIGDP MALVTVASFV
101: AMWLLLYFYR DHPLVLYGRH ISDRVIVFGL ILGSLWALWF INSLQCLILG VVTSVLLCLV HAIIRNSDDL FVQEKDVVVP SNFLHWS
101: AMWLLLYFYR DHPLVLYGRH ISDRVIVFGL ILGSLWALWF INSLQCLILG VVTSVLLCLV HAIIRNSDDL FVQEKDVVVP SNFLHWS
Arabidopsis Description
PRA1G1PRA1 family protein G1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWD1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.