Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031001.1-P | Field mustard | plasma membrane | 94.48 | 94.48 |
| CDY26225 | Canola | plasma membrane | 83.98 | 82.61 |
| CDY59501 | Canola | plasma membrane | 83.98 | 82.61 |
| AT1G17700.1 | Thale cress | plasma membrane | 81.22 | 81.67 |
| PGSC0003DMT400006409 | Potato | plasma membrane | 49.72 | 49.45 |
| CDY24050 | Canola | cytosol, plasma membrane, plastid | 50.28 | 48.66 |
| KRH47141 | Soybean | plasma membrane | 47.51 | 48.31 |
| KRH44167 | Soybean | plasma membrane | 46.96 | 48.3 |
| KRH10001 | Soybean | mitochondrion | 48.62 | 47.83 |
| CDY33064 | Canola | cytosol, plasma membrane, plastid | 49.17 | 47.59 |
| Solyc03g121460.1.1 | Tomato | plastid | 47.51 | 47.25 |
| KRH23330 | Soybean | plastid | 47.51 | 46.74 |
| VIT_09s0002g02400.t01 | Wine grape | plastid | 49.72 | 46.63 |
| CDY51735 | Canola | plasma membrane | 45.3 | 45.05 |
| CDX97509 | Canola | plasma membrane | 44.75 | 44.75 |
| CDY23634 | Canola | plasma membrane | 44.75 | 44.75 |
| CDY37483 | Canola | plasma membrane | 44.75 | 44.51 |
| CDY26125 | Canola | cytosol, plasma membrane, plastid | 45.86 | 43.92 |
| GSMUA_Achr7P09070_001 | Banana | plastid | 45.3 | 43.62 |
| CDY08228 | Canola | plasma membrane | 44.75 | 42.86 |
| Os05t0200280-01 | Rice | plasma membrane | 42.54 | 39.9 |
| EES00126 | Sorghum | plastid | 41.44 | 39.06 |
| Zm00001d039455_P002 | Maize | extracellular, mitochondrion | 41.44 | 38.86 |
| TraesCS1D01G130300.1 | Wheat | plastid | 40.33 | 38.22 |
| TraesCS1B01G143000.1 | Wheat | plastid | 40.33 | 38.02 |
| TraesCS3D01G106500.1 | Wheat | plastid | 39.78 | 37.89 |
| TraesCS3B01G122600.1 | Wheat | plastid | 39.78 | 37.89 |
| TraesCS1A01G124100.1 | Wheat | plastid | 39.78 | 37.7 |
| TraesCS3A01G104300.1 | Wheat | plastid | 39.23 | 37.17 |
| Os01t0196500-01 | Rice | plastid | 40.33 | 36.32 |
| Zm00001d037747_P001 | Maize | plastid | 36.46 | 35.11 |
| OQU77594 | Sorghum | plastid | 37.57 | 34.69 |
| HORVU1Hr1G028520.1 | Barley | plastid | 39.23 | 32.87 |
| CDX86646 | Canola | plasma membrane | 31.49 | 32.02 |
| CDY15494 | Canola | plasma membrane | 30.94 | 31.46 |
| CDY06788 | Canola | plastid | 33.15 | 30.93 |
| CDY43514 | Canola | mitochondrion | 29.83 | 30.86 |
| CDX95035 | Canola | plastid | 35.36 | 30.77 |
| CDX93539 | Canola | plastid | 35.36 | 30.77 |
| CDY18870 | Canola | plastid | 34.25 | 29.67 |
| CDX74794 | Canola | plastid | 34.81 | 29.58 |
| CDX70153 | Canola | plastid | 34.81 | 29.3 |
| CDX67633 | Canola | plastid | 33.7 | 28.91 |
| HORVU3Hr1G018940.2 | Barley | plastid | 40.33 | 28.63 |
| CDY31997 | Canola | plastid | 33.15 | 28.57 |
| CDY51077 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 28.73 | 28.11 |
| CDX72173 | Canola | plastid | 31.49 | 28.08 |
| CDY27245 | Canola | plastid | 31.49 | 28.08 |
| CDY63156 | Canola | plastid | 33.15 | 27.52 |
| CDY07736 | Canola | plastid | 33.7 | 27.48 |
| CDY50022 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 28.18 | 27.42 |
| CDY54457 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 27.07 | 26.92 |
| CDY51734 | Canola | plastid | 30.39 | 26.32 |
| CDY61529 | Canola | plastid | 18.23 | 26.19 |
| CDY32804 | Canola | plastid | 27.07 | 26.06 |
| CDY05662 | Canola | plastid | 10.5 | 26.03 |
| CDY41253 | Canola | plastid | 12.15 | 25.58 |
| CDY37482 | Canola | plastid | 29.28 | 25.36 |
| CDY17405 | Canola | plastid | 26.52 | 25.0 |
| CDX80758 | Canola | plastid | 29.28 | 24.77 |
| CDY51733 | Canola | plastid | 29.28 | 24.77 |
| CDY25186 | Canola | plastid | 11.6 | 24.42 |
| CDX81033 | Canola | plastid | 28.18 | 23.39 |
| CDY55133 | Canola | plasma membrane | 27.07 | 23.0 |
| CDY58876 | Canola | plastid | 27.62 | 22.94 |
Protein Annotations
| EnsemblPlants:CDX81845 | EnsemblPlantsGene:GSBRNA2T00136791001 | GO:A0A078CYE0 | InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF2 |
| PFAM:PF03208 | ProteinID:CDX81845 | ProteinID:CDX81845.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE24FC |
| MapMan:22.8.4.3.2 | : | : | : | : | : |
Description
BnaC08g37560D
Coordinates
chrLK031826:+:1088686..1089231
Molecular Weight (calculated)
20490.2 Da
IEP (calculated)
9.364
GRAVY (calculated)
0.353
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTYGTNPTS ANDLAPKLEY ITRADDHHNV RPGLATRRPW KQMLDLRSFN FPRKIATVIT RIKANTVYFQ TNYTIVVLFS VFLSLVSNPL SLLILLAIIG
101: AWLFLYFLRD EPLTVFDREI DHRVVLIAMS VLTLLILFLT DAKLNIAVAV VAGVAVVLSH AAVRKTEDMY QNEDETSRLI P
101: AWLFLYFLRD EPLTVFDREI DHRVVLIAMS VLTLLILFLT DAKLNIAVAV VAGVAVVLSH AAVRKTEDMY QNEDETSRLI P
001: MTTYGTNQKS SNDLAPKLEY ITRGINQHKR SGLATRRPWK QMLDLGSFNF PRKLATVITR IRANTVYFQT NYTIVVLFSV FLSLIWNPFS LLVLLALLGA
101: WLFLYFLRDE PLTVFDREID HRIVLIIMSV ITLSILFLTD AKLNIAVAIV AGALAVLSHA AVRKTEDLFQ TDEETSLLNP
101: WLFLYFLRDE PLTVFDREID HRIVLIIMSV ITLSILFLTD AKLNIAVAIV AGALAVLSHA AVRKTEDLFQ TDEETSLLNP
Arabidopsis Description
PRA1F1PRA1 family protein F1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ63]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.