Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021502.1-P | Field mustard | plastid | 97.66 | 97.66 |
| CDY55133 | Canola | plasma membrane | 90.19 | 90.61 |
| CDY37482 | Canola | plastid | 60.28 | 61.72 |
| CDY51734 | Canola | plastid | 58.88 | 60.29 |
| AT3G13720.1 | Thale cress | cytosol, plasma membrane, plastid | 46.26 | 52.66 |
| CDY23634 | Canola | plasma membrane | 42.52 | 50.28 |
| CDX97509 | Canola | plasma membrane | 41.12 | 48.62 |
| CDY37483 | Canola | plasma membrane | 40.65 | 47.8 |
| CDY51735 | Canola | plasma membrane | 40.19 | 47.25 |
| Solyc03g121460.1.1 | Tomato | plastid | 36.45 | 42.86 |
| PGSC0003DMT400006409 | Potato | plasma membrane | 35.98 | 42.31 |
| CDY08228 | Canola | plasma membrane | 35.05 | 39.68 |
| CDY33064 | Canola | cytosol, plasma membrane, plastid | 34.58 | 39.57 |
| CDY24050 | Canola | cytosol, plasma membrane, plastid | 34.11 | 39.04 |
| CDY26125 | Canola | cytosol, plasma membrane, plastid | 34.11 | 38.62 |
| KRH23330 | Soybean | plastid | 32.71 | 38.04 |
| KRH10001 | Soybean | mitochondrion | 31.78 | 36.96 |
| KRH47141 | Soybean | plasma membrane | 28.97 | 34.83 |
| VIT_09s0002g02400.t01 | Wine grape | plastid | 31.31 | 34.72 |
| GSMUA_Achr7P09070_001 | Banana | plastid | 29.91 | 34.04 |
| KRH44167 | Soybean | plasma membrane | 27.1 | 32.95 |
| CDY26225 | Canola | plasma membrane | 26.64 | 30.98 |
| CDY59501 | Canola | plasma membrane | 26.17 | 30.43 |
| Zm00001d039455_P002 | Maize | extracellular, mitochondrion | 26.64 | 29.53 |
| CDX81845 | Canola | plasma membrane | 24.77 | 29.28 |
| TraesCS3D01G106500.1 | Wheat | plastid | 25.7 | 28.95 |
| TraesCS3B01G122600.1 | Wheat | plastid | 25.7 | 28.95 |
| TraesCS3A01G104300.1 | Wheat | plastid | 25.7 | 28.8 |
| EES00126 | Sorghum | plastid | 25.7 | 28.65 |
| CDY61529 | Canola | plastid | 15.89 | 26.98 |
| Os05t0200280-01 | Rice | plasma membrane | 24.3 | 26.94 |
| CDY06788 | Canola | plastid | 24.3 | 26.8 |
| CDY41253 | Canola | plastid | 10.75 | 26.74 |
| CDY25186 | Canola | plastid | 10.75 | 26.74 |
| TraesCS1D01G130300.1 | Wheat | plastid | 23.36 | 26.18 |
| TraesCS1A01G124100.1 | Wheat | plastid | 23.36 | 26.18 |
| TraesCS1B01G143000.1 | Wheat | plastid | 23.36 | 26.04 |
| CDY05662 | Canola | plastid | 8.88 | 26.03 |
| CDY43514 | Canola | mitochondrion | 21.03 | 25.71 |
| CDX95035 | Canola | plastid | 24.77 | 25.48 |
| Os01t0196500-01 | Rice | plastid | 23.83 | 25.37 |
| CDY51077 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 21.5 | 24.86 |
| CDX93539 | Canola | plastid | 23.83 | 24.52 |
| CDY32804 | Canola | plastid | 21.5 | 24.47 |
| CDY50022 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 21.03 | 24.19 |
| CDX70153 | Canola | plastid | 23.83 | 23.72 |
| CDY27245 | Canola | plastid | 22.43 | 23.65 |
| CDX72173 | Canola | plastid | 22.43 | 23.65 |
| CDY15494 | Canola | plasma membrane | 19.16 | 23.03 |
| CDX86646 | Canola | plasma membrane | 19.16 | 23.03 |
| HORVU1Hr1G028520.1 | Barley | plastid | 22.9 | 22.69 |
| CDY17405 | Canola | plastid | 20.09 | 22.4 |
| CDY31997 | Canola | plastid | 21.96 | 22.38 |
| CDX67633 | Canola | plastid | 21.96 | 22.27 |
| CDY07736 | Canola | plastid | 22.9 | 22.07 |
| CDY58876 | Canola | plastid | 22.43 | 22.02 |
| CDX80758 | Canola | plastid | 21.96 | 21.96 |
| Zm00001d037747_P001 | Maize | plastid | 19.16 | 21.81 |
| CDX74794 | Canola | plastid | 21.5 | 21.6 |
| CDY63156 | Canola | plastid | 21.96 | 21.56 |
| OQU77594 | Sorghum | plastid | 19.63 | 21.43 |
| CDX81033 | Canola | plastid | 21.5 | 21.1 |
| CDY18870 | Canola | plastid | 20.56 | 21.05 |
| HORVU3Hr1G018940.2 | Barley | plastid | 24.77 | 20.78 |
| CDY54457 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 15.42 | 18.13 |
Protein Annotations
| EnsemblPlants:CDY51733 | EnsemblPlantsGene:GSBRNA2T00004095001 | GO:A0A078IRL2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF2 | PFAM:PF03208 | ProteinID:CDY51733 | ProteinID:CDY51733.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EEBC26 | UniProt:A0A078IRL2 | MapMan:22.8.4.3.2 | : |
Description
BnaA01g37160DPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRL2]
Coordinates
chrLK033023:-:24863..25648
Molecular Weight (calculated)
24159.7 Da
IEP (calculated)
6.657
GRAVY (calculated)
0.443
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNYGAIPTS SRASPSPPVV DVESLSSDNN QCTACAMPRR PWGVMFDLHS MGLPHGISDA SSRFKTNYNY FRTNYGIFFT INSLIAIFGS LIKHPVSLMA
101: FTLLVSIYIL LYYLQEDEEP IKLFCCQISD QMIRIVKTCL FLLTMALLVV TNSSYVIYGW PLVIVYVPIL IHTVVRKTED LFLGEEAATM TETYGSSLRL
201: HVMFVLFNLY LSFG
101: FTLLVSIYIL LYYLQEDEEP IKLFCCQISD QMIRIVKTCL FLLTMALLVV TNSSYVIYGW PLVIVYVPIL IHTVVRKTED LFLGEEAATM TETYGSSLRL
201: HVMFVLFNLY LSFG
001: MANNDEITTS SHASPAVNHE SISRAKQRIK DGLATRRSWR VMFDLHSTGL PHGVSDVFSR IKTNLAYFRS NYAIVILNVI FFSLIWHPTS LIVFTGLVFL
101: WIFLYFLRDV PLKVFRFQID DRAVLIGLSV ITIVLLLLTN ATFNIVAALM AGAVLVLIHA VIRKTDDLFL DEEAATTETS GLTSHPSS
101: WIFLYFLRDV PLKVFRFQID DRAVLIGLSV ITIVLLLLTN ATFNIVAALM AGAVLVLIHA VIRKTDDLFL DEEAATTETS GLTSHPSS
Arabidopsis Description
PRA1F4PRA1 family protein F4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIC7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.