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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43514 Canola mitochondrion 86.08 95.43
AT4G29658.2 Thale cress plastid 77.84 79.47
VIT_11s0016g02330.t01 Wine grape plastid 43.81 44.97
KRH49060 Soybean plasma membrane 41.24 40.4
KRH74153 Soybean endoplasmic reticulum, peroxisome, plasma membrane 41.24 40.0
GSMUA_Achr7P09070_001 Banana plastid 38.66 39.89
Zm00001d039455_P002 Maize extracellular, mitochondrion 39.18 39.38
CDY33064 Canola cytosol, plasma membrane, plastid 36.6 37.97
EES00126 Sorghum plastid 37.11 37.5
CDY24050 Canola cytosol, plasma membrane, plastid 35.57 36.9
CDY23634 Canola plasma membrane 34.02 36.46
CDY51735 Canola plasma membrane 34.02 36.26
TraesCS3B01G122600.1 Wheat plastid 35.05 35.79
TraesCS3D01G106500.1 Wheat plastid 35.05 35.79
CDY37483 Canola plasma membrane 33.51 35.71
CDX97509 Canola plasma membrane 32.99 35.36
Zm00001d037747_P001 Maize plastid 34.02 35.11
TraesCS3A01G104300.1 Wheat plastid 34.54 35.08
CDY26125 Canola cytosol, plasma membrane, plastid 34.02 34.92
CDY08228 Canola plasma membrane 32.99 33.86
OQU77594 Sorghum plastid 34.02 33.67
CDX81845 Canola plasma membrane 30.93 33.15
Os01t0196500-01 Rice plastid 34.02 32.84
Os05t0200280-01 Rice plasma membrane 32.47 32.64
CDY26225 Canola plasma membrane 30.93 32.61
CDY59501 Canola plasma membrane 30.93 32.61
TraesCS1D01G130300.1 Wheat plastid 31.96 32.46
TraesCS1A01G124100.1 Wheat plastid 31.44 31.94
CDY51077 Canola cytosol, endoplasmic reticulum, plasma membrane 30.41 31.89
TraesCS1B01G143000.1 Wheat plastid 31.44 31.77
CDY50022 Canola cytosol, endoplasmic reticulum, plasma membrane 30.41 31.72
CDY05662 Canola plastid 11.34 30.14
CDX86646 Canola plasma membrane 27.32 29.78
CDY41253 Canola plastid 12.89 29.07
CDY25186 Canola plastid 12.89 29.07
CDX70153 Canola plastid 31.96 28.84
CDY15494 Canola plasma membrane 26.29 28.65
CDY27245 Canola plastid 29.9 28.57
CDX72173 Canola plastid 29.9 28.57
CDX95035 Canola plastid 30.41 28.37
CDX93539 Canola plastid 30.41 28.37
HORVU1Hr1G028520.1 Barley plastid 31.44 28.24
HORVU3Hr1G018940.2 Barley plastid 37.11 28.24
CDX74794 Canola plastid 30.41 27.7
CDY32804 Canola plastid 26.8 27.66
CDY31997 Canola plastid 29.9 27.62
CDY18870 Canola plastid 29.38 27.27
CDX67633 Canola plastid 29.38 27.01
CDY17405 Canola plastid 26.29 26.56
CDX80758 Canola plastid 28.87 26.17
CDY63156 Canola plastid 28.87 25.69
CDY51734 Canola plastid 26.8 24.88
CDY37482 Canola plastid 26.8 24.88
CDY07736 Canola plastid 28.35 24.77
CDY61529 Canola plastid 15.98 24.6
CDY55133 Canola plasma membrane 26.8 24.41
CDY58876 Canola plastid 27.32 24.31
CDX81033 Canola plastid 27.32 24.31
CDY51733 Canola plastid 26.8 24.3
CDY54457 Canola endoplasmic reticulum, peroxisome, plasma membrane 20.1 21.43
Protein Annotations
EnsemblPlants:CDY06788EnsemblPlantsGene:GSBRNA2T00123025001GO:A0A078F505InterPro:Prenylated_rab_accept_PRA1PANTHER:PTHR19317PANTHER:PTHR19317:SF2
PFAM:PF03208ProteinID:CDY06788ProteinID:CDY06788.1SEG:segTMHMM:TMhelixUniParc:UPI0004EB8625
MapMan:22.8.4.3.2:::::
Description
BnaC01g08870D
Coordinates
chrLK031973:-:297014..297598
Molecular Weight (calculated)
21194.2 Da
IEP (calculated)
6.240
GRAVY (calculated)
0.726
Length
194 amino acids
Sequence
(BLAST)
001: MTTYGTIPSQ ANAASNQSML GRAKGLISLG LSSRRPWLEL VQWSSLSLPT SFSVATERIK TNIMIFRTNY LVIFVVAIFI SMLWQPVHLA VFVVLIIAWL
101: YVYSRDNEPL VIFGSVIDDS ALVLTLLVLT LCIILLTNVT GGILLGVLAG LPVVLVHGMC RNTESLFVLE DDDEEKGVTM SVASSSHFSS SLTK
Best Arabidopsis Sequence Match ( AT4G29658.2 )
(BLAST)
001: MTTYGTIPSQ ENASSSLSLL GRAKELISLG LSSQRPWLEL VQCSAFSLPI SFSVATERIK SNIMIFRTNY IVIFIVSIFI SMLWQPVHLS VFVILIVAWL
101: YVYSRDNEPW VIFGSVIDDS TLVLVLLVLT IGIFLLTDVS RGIVIGVLAG LPVVLVHGMC RRNTEMLFVL EDDEEKVAMN TSSSSLSSSS
Arabidopsis Description
PRA1.CPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B7W4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.