Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07736 | Canola | plastid | 94.95 | 93.24 |
| AT2G38360.1 | Thale cress | plastid | 89.91 | 89.09 |
| CDY54457 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 59.63 | 71.43 |
| CDY61529 | Canola | plastid | 38.99 | 67.46 |
| KRH76033 | Soybean | endoplasmic reticulum | 64.22 | 63.93 |
| GSMUA_Achr7P22310_001 | Banana | plastid | 53.67 | 62.23 |
| CDY31997 | Canola | plastid | 59.63 | 61.9 |
| KRH65569 | Soybean | plastid | 64.22 | 61.67 |
| CDX67633 | Canola | plastid | 59.63 | 61.61 |
| GSMUA_Achr5P14320_001 | Banana | plastid | 52.75 | 61.5 |
| Solyc10g076360.1.1 | Tomato | plastid | 62.84 | 61.16 |
| GSMUA_Achr10P... | Banana | plastid | 50.92 | 60.99 |
| GSMUA_Achr4P18690_001 | Banana | plastid | 61.47 | 60.63 |
| CDY27245 | Canola | plastid | 56.42 | 60.59 |
| PGSC0003DMT400041063 | Potato | plastid | 62.84 | 60.09 |
| CDX72173 | Canola | plastid | 55.5 | 59.61 |
| PGSC0003DMT400034320 | Potato | plastid | 57.8 | 59.43 |
| CDX80758 | Canola | plastid | 58.26 | 59.35 |
| CDY05662 | Canola | plastid | 19.72 | 58.9 |
| CDX70153 | Canola | plastid | 56.88 | 57.67 |
| GSMUA_Achr5P07440_001 | Banana | plastid | 56.42 | 57.21 |
| KRG93818 | Soybean | extracellular, plasma membrane, vacuole | 21.56 | 55.95 |
| CDX74794 | Canola | plastid | 54.59 | 55.87 |
| GSMUA_Achr3P10010_001 | Banana | plastid | 55.05 | 55.56 |
| Zm00001d010603_P002 | Maize | mitochondrion | 54.13 | 54.38 |
| CDY18870 | Canola | plastid | 51.83 | 54.07 |
| CDY25186 | Canola | plastid | 21.1 | 53.49 |
| KXG22202 | Sorghum | plastid | 53.21 | 53.46 |
| CDY41253 | Canola | plastid | 20.64 | 52.33 |
| Os11t0107600-01 | Rice | plastid | 52.29 | 51.82 |
| TraesCS4B01G137300.1 | Wheat | plastid | 53.21 | 51.1 |
| Os12t0107600-00 | Rice | plastid | 51.38 | 50.91 |
| TraesCS1B01G307400.1 | Wheat | golgi, unclear | 51.38 | 50.91 |
| HORVU1Hr1G070360.1 | Barley | plastid | 51.83 | 50.9 |
| KRH49465 | Soybean | plastid | 51.83 | 50.67 |
| KRH32827 | Soybean | plastid | 52.29 | 50.44 |
| HORVU4Hr1G024530.1 | Barley | plastid | 52.29 | 50.44 |
| TraesCS1D01G293300.1 | Wheat | plastid | 50.92 | 50.23 |
| TraesCS4D01G132000.1 | Wheat | plastid | 52.29 | 50.22 |
| Os05t0474400-01 | Rice | plasma membrane, vacuole | 50.46 | 50.0 |
| TraesCS1A01G297900.1 | Wheat | plastid | 50.46 | 49.77 |
| TraesCS4A01G180500.1 | Wheat | plastid | 51.83 | 49.56 |
| Zm00001d052322_P001 | Maize | plastid | 42.66 | 49.21 |
| OQU82692 | Sorghum | plastid | 50.46 | 49.11 |
| HORVU3Hr1G088130.1 | Barley | plastid | 49.54 | 49.09 |
| CDY58876 | Canola | plastid | 49.08 | 49.08 |
| CDX81033 | Canola | plastid | 48.62 | 48.62 |
| KRH00333 | Soybean | plastid | 50.46 | 48.46 |
| TraesCS3A01G348100.1 | Wheat | plastid | 46.79 | 48.11 |
| EES15518 | Sorghum | plastid | 51.38 | 48.07 |
| Zm00001d043018_P001 | Maize | mitochondrion | 48.17 | 47.73 |
| Os01t0827400-01 | Rice | extracellular, mitochondrion, plasma membrane | 31.65 | 47.59 |
| TraesCS3D01G341700.1 | Wheat | plastid | 48.17 | 47.51 |
| TraesCS3B01G380000.1 | Wheat | plastid | 46.33 | 47.42 |
| EES03822 | Sorghum | plastid | 47.25 | 46.19 |
| TraesCS5B01G150200.1 | Wheat | plastid | 46.33 | 44.69 |
| TraesCS5D01G156800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 45.87 | 44.25 |
| TraesCS5A01G151600.1 | Wheat | plastid | 45.87 | 44.25 |
| HORVU2Hr1G086930.1 | Barley | cytosol, plastid | 22.02 | 42.86 |
| HORVU5Hr1G047520.1 | Barley | endoplasmic reticulum, plastid | 44.95 | 40.5 |
| KXG38626 | Sorghum | golgi, plasma membrane, plastid | 33.95 | 40.0 |
| CDY51735 | Canola | plasma membrane | 32.11 | 38.46 |
| CDY37483 | Canola | plasma membrane | 31.19 | 37.36 |
| CDY23634 | Canola | plasma membrane | 27.98 | 33.7 |
| CDY33064 | Canola | cytosol, plasma membrane, plastid | 28.44 | 33.16 |
| CDX81845 | Canola | plasma membrane | 27.52 | 33.15 |
| CDY24050 | Canola | cytosol, plasma membrane, plastid | 27.98 | 32.62 |
| CDY26225 | Canola | plasma membrane | 27.52 | 32.61 |
| CDX97509 | Canola | plasma membrane | 27.06 | 32.6 |
| CDY59501 | Canola | plasma membrane | 26.61 | 31.52 |
| OQU79263 | Sorghum | plastid | 23.85 | 31.52 |
| CDY32804 | Canola | plastid | 27.06 | 31.38 |
| CDY51077 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 26.61 | 31.35 |
| CDX95035 | Canola | plastid | 29.82 | 31.25 |
| CDX93539 | Canola | plastid | 29.82 | 31.25 |
| CDY50022 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 26.61 | 31.18 |
| CDY17405 | Canola | plastid | 27.06 | 30.73 |
| CDY43514 | Canola | mitochondrion | 23.39 | 29.14 |
| CDY06788 | Canola | plastid | 25.69 | 28.87 |
| CDY15494 | Canola | plasma membrane | 22.94 | 28.09 |
| CDX86646 | Canola | plasma membrane | 22.94 | 28.09 |
| CDY26125 | Canola | cytosol, plasma membrane, plastid | 24.31 | 28.04 |
| CDY08228 | Canola | plasma membrane | 23.85 | 27.51 |
| CDY37482 | Canola | plastid | 22.48 | 23.45 |
| CDY51734 | Canola | plastid | 22.02 | 22.97 |
| CDY51733 | Canola | plastid | 21.56 | 21.96 |
| CDY55133 | Canola | plasma membrane | 20.64 | 21.13 |
Protein Annotations
| EnsemblPlants:CDY63156 | EnsemblPlantsGene:GSBRNA2T00037967001 | GO:A0A078JDS8 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF34 | PFAM:PF03208 | ProteinID:CDY63156 | ProteinID:CDY63156.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EC7252 | UniProt:A0A078JDS8 | MapMan:22.8.4.3.2 | : |
Description
BnaCnng41520DPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDS8]
Coordinates
chrLK034252:-:6860..7588
Molecular Weight (calculated)
23180.1 Da
IEP (calculated)
7.345
GRAVY (calculated)
0.573
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTAPPTLP ISIPSAAAPS SLESQQPPIA TPAFRAFINR ISETVANGLS QRRPWAELAD RSALSKPESI SEAAVRIRKN YSYFKVNYLA VATAIVGFSL
101: VTHPFSLAFL LCLLASWLFL YLFRPSDQPV VILGRTFSDR ETLGCLILFS IFVVFLTDVG SVLVSAVMVG VALICAHGAF RAPEDLFLDE QEPAATGFLS
201: FLGGAASSAA PAVIAARG
101: VTHPFSLAFL LCLLASWLFL YLFRPSDQPV VILGRTFSDR ETLGCLILFS IFVVFLTDVG SVLVSAVMVG VALICAHGAF RAPEDLFLDE QEPAATGFLS
201: FLGGAASSAA PAVIAARG
001: MASSAPPVLP ISNPQTVPSA APSSVESQPP IATPAFRNFI NQITETVKNG LSKRRPWAEL ADRSALSKPE SISDAAVRIR KNYSYFKVNY LTVATAIVGF
101: SLVTHPFSLV FLLCLLASWL FLYLFRPTDQ PIVLFGRTFS DRETLGCLIL FSIFVIFLTD VGSVLVSAMM IGVALICAHG AFRAPEDLFL DEQEPAATGF
201: LSFLGGAASS AAPAVIAARV
101: SLVTHPFSLV FLLCLLASWL FLYLFRPTDQ PIVLFGRTFS DRETLGCLIL FSIFVIFLTD VGSVLVSAMM IGVALICAHG AFRAPEDLFL DEQEPAATGF
201: LSFLGGAASS AAPAVIAARV
Arabidopsis Description
PRA1B4PRA1 family protein B4 [Source:UniProtKB/Swiss-Prot;Acc:O80915]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.