CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007796.1-P	Field mustard	plastid	94.19	94.19
CDY25186	Canola	plastid	94.19	94.19
CDY05662	Canola	plastid	77.91	91.78
CDY31997	Canola	plastid	90.7	37.14
CDX67633	Canola	plastid	89.53	36.49
CDX72173	Canola	plastid	83.72	35.47
CDY27245	Canola	plastid	83.72	35.47
AT3G56110.1	Thale cress	plastid	86.05	35.41
CDY61529	Canola	plastid	44.19	30.16
CDX74794	Canola	plastid	70.93	28.64
CDY18870	Canola	plastid	67.44	27.75
KRH73238	Soybean	plastid	60.47	24.19
CDX70153	Canola	plastid	58.14	23.26
KRH14895	Soybean	plastid	58.14	23.26
Solyc06g050570.1.1	Tomato	plastid	56.98	22.48
PGSC0003DMT400061546	Potato	plastid	56.98	22.48
CDY63156	Canola	plastid	52.33	20.64
CDY07736	Canola	plastid	52.33	20.27
CDX80758	Canola	plastid	45.35	18.22
CDY23634	Canola	plasma membrane	36.05	17.13
CDX97509	Canola	plasma membrane	36.05	17.13
CDX81033	Canola	plastid	43.02	16.97
CDY58876	Canola	plastid	43.02	16.97
CDY33064	Canola	cytosol, plasma membrane, plastid	36.05	16.58
CDY24050	Canola	cytosol, plasma membrane, plastid	34.88	16.04
CDY51735	Canola	plasma membrane	32.56	15.38
CDY37483	Canola	plasma membrane	32.56	15.38
CDY26125	Canola	cytosol, plasma membrane, plastid	32.56	14.81
CDY08228	Canola	plasma membrane	32.56	14.81
CDY51077	Canola	cytosol, endoplasmic reticulum, plasma membrane	29.07	13.51
CDY50022	Canola	cytosol, endoplasmic reticulum, plasma membrane	29.07	13.44
CDY06788	Canola	plastid	29.07	12.89
CDY43514	Canola	mitochondrion	25.58	12.57
CDY32804	Canola	plastid	26.74	12.23
CDX81845	Canola	plasma membrane	25.58	12.15
CDY26225	Canola	plasma membrane	25.58	11.96
CDY37482	Canola	plastid	26.74	11.0
CDY17405	Canola	plastid	24.42	10.94
CDY59501	Canola	plasma membrane	23.26	10.87
CDY51733	Canola	plastid	26.74	10.75
CDY51734	Canola	plastid	25.58	10.53
CDY55133	Canola	plasma membrane	25.58	10.33
CDY15494	Canola	plasma membrane	20.93	10.11
CDX95035	Canola	plastid	24.42	10.1
CDX93539	Canola	plastid	24.42	10.1
CDX86646	Canola	plasma membrane	19.77	9.55
CDY54457	Canola	endoplasmic reticulum, peroxisome, plasma membrane	17.44	8.24
KRH54835	Soybean	endoplasmic reticulum, extracellular, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:CDY41253	EnsemblPlantsGene:GSBRNA2T00072676001	GO:GO:0005575	GO:GO:0016020	InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR19317
PANTHER:PTHR19317:SF34	PFAM:PF03208	ProteinID:CDY41253	ProteinID:CDY41253.1	UniParc:UPI0004EF09A8	UniProt:A0A078HWV8
MapMan:35.1	:	:	:	:	:

Description

BnaA01g12860DPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWV8]

Coordinates

chrLK032494:-:70901..71793

Molecular Weight (calculated)

9668.6 Da

IEP (calculated)

10.432

GRAVY (calculated)

-0.210

Length

86 amino acids

Sequence
(BLAST)

1: MSTPPLLPVT NQQAVQSQPP INTPAFHTFF SHLSTSIRDG LSQRRPWAEL VDRSSMARPE SLTDALSRIG KNLVYFKVNY VTVIQL

Best Arabidopsis Sequence Match ( AT3G56110.1 )
(BLAST)

001: MATPPTLPVT NQQAVQSQPP INTPAFRTFF SRLSTSIRDG LSQRRPWTEL IDRSSMARPE SLTDALSRIR KNLAYFKVNY VAIVSLVLAF SLFSHPLSLL
101: VLIGLLGGWM FLYLFRPSDQ PLVVFGRTFS DRETLLALVL STIVVVFMTS VGSLLTSALM IGVAIVCVHG AFVVPDDLFL DEQEPANAGL LSFLGGSATS
201: AAAAVSGRV

Arabidopsis Description

PRA1B1PRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.