CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX89402
CDX89404
CDX94426
CDX94429
CDY49480
CDY66007

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50110.1	CDX89402	AT4G25660.1	21798944
AT3G50110.1	CDX89404	AT4G25660.1	21798944
AT3G50110.1	CDX94426	AT4G25660.1	21798944
AT3G50110.1	CDX94429	AT4G25660.1	21798944
AT3G50110.1	CDY49480	AT4G25660.1	21798944
AT3G50110.1	CDY66007	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02094	Canola	cytosol	86.92	89.7
Bra012908.1-P	Field mustard	cytosol	83.99	87.3
AT3G50110.1	Thale cress	cytosol	81.41	74.84
VIT_07s0031g00020.t01	Wine grape	cytosol	50.77	60.95
Solyc02g093000.2.1	Tomato	cytosol	47.33	60.71
GSMUA_Achr7P21640_001	Banana	cytosol	56.28	55.71
GSMUA_Achr10P...	Banana	cytosol	56.45	55.41
PGSC0003DMT400064308	Potato	cytosol, plastid	56.97	54.98
CDX95448	Canola	cytosol	55.42	54.39
KRH28426	Soybean	cytosol, plastid	56.63	54.2
KRH77047	Soybean	nucleus, plastid	56.11	53.8
CDY46177	Canola	cytosol	54.56	53.73
CDY50153	Canola	cytosol	54.56	53.64
CDY63391	Canola	cytosol	54.22	53.21
OQU88311	Sorghum	cytosol	57.49	51.54
Os12t0407500-01	Rice	plasma membrane	58.18	51.37
TraesCS5D01G117900.1	Wheat	cytosol	57.31	51.0
TraesCS5B01G115500.1	Wheat	cytosol	57.31	50.92
HORVU5Hr1G031300.2	Barley	cytosol	57.14	50.76
TraesCS5A01G116100.1	Wheat	cytosol	56.8	50.54
GSMUA_Achr5P07740_001	Banana	cytosol	50.43	50.09
CDY22969	Canola	cytosol, mitochondrion	11.7	49.28
Zm00001d007942_P002	Maize	cytosol	58.35	47.28
CDY65163	Canola	plastid	32.01	46.5
Os12t0407200-01	Rice	cytosol, extracellular	8.26	42.86
CDY24016	Canola	extracellular	7.06	39.81
CDY70932	Canola	extracellular, golgi	9.12	24.2
CDX74467	Canola	cytosol, mitochondrion, nucleus, plastid	15.66	22.03
CDX67428	Canola	nucleus	15.32	21.39
CDY37003	Canola	nucleus	15.15	21.15
CDY37863	Canola	mitochondrion	16.18	19.26

Protein Annotations

MapMan:18.4.23.2.1	Gene3D:3.90.190.10	GO:A0A078GCG0	UniProt:A0A078GCG0	EnsemblPlants:CDY23021	ProteinID:CDY23021
ProteinID:CDY23021.1	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0006464
GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	GO:GO:0019538	GO:GO:0035335	EnsemblPlantsGene:GSBRNA2T00021475001	InterPro:IPR014020	InterPro:IPR029021
InterPro:IPR029023	PFAM:PF00782	ScanProsite:PS00383	PFscan:PS51181	PFscan:PS51182	PANTHER:PTHR12305
PANTHER:PTHR12305:SF57	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM01326	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase
InterPro:Tyr_Pase_AS	UniParc:UPI0004EE5153	SEG:seg	:	:	:

Description

BnaC07g31660DBnaC07g31660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCG0]

Coordinates

chrLK032139:+:120447..123669

Molecular Weight (calculated)

64380.0 Da

IEP (calculated)

5.088

GRAVY (calculated)

-0.545

Length

581 amino acids

Sequence
(BLAST)

001: METDHADSLP PKISEKDAGG ETPRDSTSTE ASTAKVEPRS KAEDEIVPCP PGSSPPSMFS SSALSSWAKS FNAADSGISA FTRFTSELGL HLPTKGSDEV
101: GESPNIQVGG GALESLTKAV VDSSLGAVKA MQVKARHIVS QNKRRYQEGE FDLDMTYITE NIIAMGFPAG DISSGLFGFF EGLYRNHMEE VIKFFETHHK
201: DKYKVYNLCS ERLYDASKFE GKVASFPFDD HNCPPIQLIP SFCQSAYTWL KDDIQNVVVV HCKAGMARTG LMICCLLLYL KFFPTAEEAI DYYNQKRCLD
301: GRALTLPSQI RYVKYYERVQ NQFGGKVPPE RRCMLRGFRL INCPYWIRPA ITISNHNDIL FSTKKHEKTK DLVPEDFWIK APKKGVVVFA IPGEAGLTEL
401: AGDFKIHFQD SDGDFYCWLN TTLTDTRTML KGIDFDGFEK RKLPAPGFHV EIVMAESDSS TQQRPQSSSG ADSGKIKSKQ SRDDDVFSDS DGEEEGNSKH
501: TESNSTIEKT AGSVHQTSRD HQINEPPKTD DHSANKSSSS SGLYNNNPVQ DDSLAVSNIK AIAADASVFS FGDEEEDYES D

Best Arabidopsis Sequence Match ( AT3G50110.1 )
(BLAST)

001: METDPANSSS KSPAVVSEKD VLIPEPSENT VGVVQDPVSA EREAHEDSIS TEASVAKVDD TQMPASSTGS EPLSKTDDIV PCPPGSSPRE SPPSIFSSSG
101: LSSWAKSFKF QQQDPNRTDS GMSAFTRFTS ELGLHLPTKG SEEVGDSRSS NTQVGGAFES LTKAVVDSSR GAVKAMQVKA RHIVSQNKRR YQEGEFDLDM
201: TYITENIIAM GFPAGDISSG LFGFFEGLYR NHMEEVIKFF ETHHKDKYKV YNLCSERLYD ASRFEGKVAS FPFDDHNCPP IQLIPSFCQS AYTWLKEDIQ
301: NVVVVHCKAG MARTGLMICC LLLYLKFFPT AEEAIDYYNQ KRCLDGKALV LPSQIRYVKY YERVQNQFDG KVPPERRCML RGFRLINCPY WIRPAITISN
401: HTDILFSTKK HQKTKDLGPE DFWIKAPKKG VVVFAIPGEA GLTELAGDFK IHFQDSDGDF YCWLNTTLTD NRTMLKGSDF DGFDKRKLPA PGFHVEIVMI
501: EPDNSQPTKS KSDSTQQQSQ SSSSADSSKL KSNEKDDDVF SDSDGEEEGN SQSYSTNEKT ASSMHTTSKP HQINEPPKRD DPSANRSVTS SSSSGHYNPI
601: PNNSLAVSDI KAIAADASVF SFGDEEEDYE SD

Arabidopsis Description

PTEN2BPhosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2B [Source:UniProtKB/Swiss-Prot;Acc:Q8H106]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.