CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67428	Canola	nucleus	98.08	98.08
Bra028431.1-P	Field mustard	nucleus	98.08	98.08
CDX74467	Canola	cytosol, mitochondrion, nucleus, plastid	89.18	89.83
CDY24016	Canola	extracellular	20.91	84.47
CDY37863	Canola	mitochondrion	88.7	75.61
VIT_14s0108g01410.t01	Wine grape	cytosol	33.89	65.89
KRH44965	Soybean	cytosol	64.42	64.27
PGSC0003DMT400059435	Potato	cytosol	60.82	61.11
Solyc03g013310.2.1	Tomato	cytosol	58.17	58.6
CDY70932	Canola	extracellular, golgi	23.32	44.29
CDY22969	Canola	cytosol, mitochondrion	7.93	23.91
CDY65163	Canola	plastid	15.62	16.25
CDY63391	Canola	cytosol	22.36	15.71
CDY46177	Canola	cytosol	22.12	15.59
CDX95448	Canola	cytosol	22.12	15.54
CDY50153	Canola	cytosol	21.88	15.4
CDY23021	Canola	cytosol	21.15	15.15
CDY02094	Canola	cytosol	20.43	15.1

Protein Annotations

MapMan:18.4.23.2.1	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	GO:A0A078HJI8	UniProt:A0A078HJI8	EnsemblPlants:CDY37003
ProteinID:CDY37003	ProteinID:CDY37003.1	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725
GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	GO:GO:0019538	GO:GO:0035335	EnsemblPlantsGene:GSBRNA2T00063185001	InterPro:IPR014020
InterPro:IPR029021	InterPro:IPR029023	PFAM:PF00782	PFAM:PF10409	ScanProsite:PS00383	PFscan:PS51181
PFscan:PS51182	PANTHER:PTHR12305	PANTHER:PTHR12305:SF80	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM01301	SMART:SM01326
SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	InterPro:Tyr_Pase_AS	UniParc:UPI0004EDE0FD

Description

BnaC06g12600DBnaC06g12600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJI8]

Coordinates

chrLK032389:+:119091..121304

Molecular Weight (calculated)

47922.8 Da

IEP (calculated)

8.889

GRAVY (calculated)

-0.382

Length

416 amino acids

Sequence
(BLAST)

001: MGLKLSRGPG KEKSALELRP HILTYLTTNS YLRNLVSKKR RRLTMGGYDL DMSYISDKLL AMSFPAERMR AVYRNPLWQV KSVLDMRHHN HYKVYNLCIE
101: ECYDPENFYG RVERFPFDDN HVPTLKMIQL FCESVHSWLS LDPKNIAVVH CMAGKGRTGL MVSAYLVYGG MAAEEALEMY ASRRTTNNNG VSIPSQRRYV
201: KYWSHLLSFG KRIGNRPPEV KLPQEHSREL LRIRVYDTVN VDSVFFVVSE LQEVPNEMYP PSVELSRGCC RQFKKGYCRS LSPRYYISHS HMNCDSEEDE
301: VLTKRKEPRL VVQMDTESSI IDEKTCLDFY FDKPVRVSGD IRITFYQKMI GSRLFYTCFN TAFITNGLLQ FSIGELDKVG GNGRSISGPD FSLELLFTPA
401: SSKSGKLLSR DDLCLP

Best Arabidopsis Sequence Match ( AT5G39400.1 )
(BLAST)

001: MGLKLSRGPV KEKSPLEFTR VHILTYFTTN SYLRNLVSKK RRRLIIGGYD LDMSYISDKL LAMSFPAERM RAVYRNPLWQ VKSVLDMRHP DHYKVYNLCI
101: EESYDPDNFY GRVERFPFDD NHVPSLKMIQ LFCESVHSWL SLDPKNIAVV HCMAGKGRTG LMVSAYLVYG GMSAEEALEM YASRRTTNNN GVSIPSQRRY
201: VKYWSDLLSF SKKGPPEVKL PQEHSRELLR IRLYDTANVD SVFFVVSELQ EVPNEMYRPS VELARGCCRQ FKKGYCRSSS PRYYISHVNC DSEEDEEVTD
301: GEEPHLVVQM DTESSIIDEK TCLDFYFDKP VRVSGDIRIT FYQKMIGSRL FYTCFNTAFI TNGLLQFSIG ELDKVGGNGR SISGPDFSLE LLFGPACSKF
401: GKFLSRDDLS LS

Arabidopsis Description

PTEN1Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.