CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG88877
KRG97263
KRG98973
KRG99305
KRH06335
KRH47754
KRH68981
KRH72403

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39400.1	KRG88877	AT4G01480.1	21798944
AT5G39400.1	KRG97263	AT4G01480.1	21798944
AT5G39400.1	KRG98973	AT4G01480.1	21798944
AT5G39400.1	KRG99305	AT4G01480.1	21798944
AT5G39400.1	KRH06335	AT4G01480.1	21798944
AT5G39400.1	KRH47754	AT4G01480.1	21798944
AT5G39400.1	KRH68981	AT4G01480.1	21798944
AT5G39400.1	KRH72403	AT4G01480.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24016	Canola	extracellular	17.75	71.84
VIT_14s0108g01410.t01	Wine grape	cytosol	35.97	70.09
Bra026263.1-P	Field mustard	nucleus	27.1	68.9
AT5G39400.1	Thale cress	nucleus	66.19	66.99
CDX74467	Canola	cytosol, mitochondrion, nucleus, plastid	66.19	66.83
Bra028431.1-P	Field mustard	nucleus	64.99	65.14
CDX67428	Canola	nucleus	64.51	64.66
CDY37003	Canola	nucleus	64.27	64.42
PGSC0003DMT400059435	Potato	cytosol	63.55	64.01
Solyc03g013310.2.1	Tomato	cytosol	62.59	63.2
Bra028240.1-P	Field mustard	plastid	65.71	57.08
CDY37863	Canola	mitochondrion	65.47	55.94
CDY70932	Canola	extracellular, golgi	18.94	36.07
KRH35761	Soybean	nucleus	21.1	14.15
KRG90993	Soybean	cytosol	20.86	13.96
KRH77047	Soybean	nucleus, plastid	19.9	13.7
KRH28426	Soybean	cytosol, plastid	19.9	13.67

Protein Annotations

EntrezGene:100809938	MapMan:18.4.23.2.1	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	EMBL:ACUP02004977	EnsemblPlantsGene:GLYMA_08G241500
GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0019538	GO:GO:0035335	InterPro:IPR014020
InterPro:IPR029021	InterPro:IPR029023	UniProt:K7L8K6	ProteinID:KRH44961.1	ProteinID:KRH44962.1	ProteinID:KRH44963.1
ProteinID:KRH44964.1	EnsemblPlants:KRH44965	ProteinID:KRH44965	ProteinID:KRH44965.1	PFAM:PF10409	PFAM:PF13350
ScanProsite:PS00383	PFscan:PS51181	PFscan:PS51182	PANTHER:PTHR12305	PANTHER:PTHR12305:SF80	InterPro:Prot-tyrosine_phosphatase-like
SMART:SM01326	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	InterPro:Tyr/Ser_Pase_IphP-type
InterPro:Tyr_Pase_AS	UniParc:UPI0002337E00	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:20618463..20624629

Molecular Weight (calculated)

47898.1 Da

IEP (calculated)

7.080

GRAVY (calculated)

-0.470

Length

417 amino acids

Sequence
(BLAST)

001: MGLKFTKQGP PKIEDPSLHN QMINYLTKNF IRNLVSKQRR RMLIAGYDLD MSYITDRVLA MSFPAQRMRA MYRNPLWQVK SVLDMRHYDH YKIYNLCIEE
101: SYDPDNFYGR VEAYPFDDNH VPSLEMIKAF CESVDSWLSS DPKNIAVIHC MAGKGRTGLM VSAYLTYCGM SADEALQLYA DRRTTNNEGV SIPSQRRYVA
201: YWDSLLSNSV PRGTGNGPTK VNLPQPCGRE LRRIRLYDTI NIDTIFFVIS ELHEIPNEVY RPPVEAYRGC CRQIKKGYQR NNSPRYYISI LEGDKDGNQS
301: ETEEPRIVVQ MDTESPAIYQ KSCLDHYFDK PIQVTGDVRL TFYEKMIGGR LFYCCFNTAF IRNSLLQLPI QELDKVGKKG TSICGPDFCL ELLFGPANAG
401: YSSSSISNDE YSNDDSL

Best Arabidopsis Sequence Match ( AT5G39400.1 )
(BLAST)

001: MGLKLSRGPV KEKSPLEFTR VHILTYFTTN SYLRNLVSKK RRRLIIGGYD LDMSYISDKL LAMSFPAERM RAVYRNPLWQ VKSVLDMRHP DHYKVYNLCI
101: EESYDPDNFY GRVERFPFDD NHVPSLKMIQ LFCESVHSWL SLDPKNIAVV HCMAGKGRTG LMVSAYLVYG GMSAEEALEM YASRRTTNNN GVSIPSQRRY
201: VKYWSDLLSF SKKGPPEVKL PQEHSRELLR IRLYDTANVD SVFFVVSELQ EVPNEMYRPS VELARGCCRQ FKKGYCRSSS PRYYISHVNC DSEEDEEVTD
301: GEEPHLVVQM DTESSIIDEK TCLDFYFDKP VRVSGDIRIT FYQKMIGSRL FYTCFNTAFI TNGLLQFSIG ELDKVGGNGR SISGPDFSLE LLFGPACSKF
401: GKFLSRDDLS LS

Arabidopsis Description

PTEN1Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.