Factsheet for Solyc03g013310.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc08g013680.2.1
Solyc08g083370.2.1
Solyc12g055830.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39400.1	Solyc08g013680.2.1	AT4G01480.1	21798944
AT5G39400.1	Solyc08g083370.2.1	AT4G01480.1	21798944
AT5G39400.1	Solyc12g055830.1.1	AT4G01480.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059435	Potato	cytosol	92.01	91.79
VIT_14s0108g01410.t01	Wine grape	cytosol	34.87	67.29
CDY24016	Canola	extracellular	15.98	64.08
KRH44965	Soybean	cytosol	63.2	62.59
Bra026263.1-P	Field mustard	nucleus	24.7	62.2
AT5G39400.1	Thale cress	nucleus	59.56	59.71
CDX74467	Canola	cytosol, mitochondrion, nucleus, plastid	59.08	59.08
Bra028431.1-P	Field mustard	nucleus	59.32	58.89
CDX67428	Canola	nucleus	59.08	58.65
CDY37003	Canola	nucleus	58.6	58.17
Bra028240.1-P	Field mustard	plastid	58.84	50.62
CDY37863	Canola	mitochondrion	58.6	49.59
CDY70932	Canola	extracellular, golgi	17.68	33.33
Solyc02g093000.2.1	Tomato	cytosol	19.85	18.1
Solyc01g107750.2.1	Tomato	plastid	23.49	15.67

Protein Annotations

MapMan:18.4.23.2.1	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004725	GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0019538	GO:GO:0035335	InterPro:IPR014020
InterPro:IPR029021	InterPro:IPR029023	UniProt:K4BEQ2	PFAM:PF00782	PFAM:PF10409	ScanProsite:PS00383
PFscan:PS51181	PFscan:PS51182	PANTHER:PTHR12305	PANTHER:PTHR12305:SF80	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM01326
SUPFAM:SSF49562	SUPFAM:SSF52799	EnsemblPlantsGene:Solyc03g013310.2	EnsemblPlants:Solyc03g013310.2.1	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase
InterPro:Tyr_Pase_AS	UniParc:UPI0002768528	SEG:seg	:	:	:

Description

Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN1 [Source:Projected from Arabidopsis thaliana (AT5G39400) UniProtKB/Swiss-Prot;Acc:Q9FLZ5]

Coordinates

chr3:+:46256924..46259799

Molecular Weight (calculated)

47562.0 Da

IEP (calculated)

8.368

GRAVY (calculated)

-0.352

Length

413 amino acids

Sequence
(BLAST)

001: MGVGLSKQGF KRGDTPSISD LHLGLINYVS RSFCIRNLVS KQRRRMLVGG YDLDMTYISD RILAMSFPAE HVRAVFRNPL WQVKSVLDMR HAGHYKVYNL
101: CIEQAYDASH FHGRVERYPI DDNHVPSLDM IKDFCEDVYS WLSSDSKNIV VIHCMAGKGR TGLMVCSYLV YTGMSAEDAL RVYAEKRTTN NEGVSIPSQR
201: RYVKYWENAL ISYTKGVPPT VKLPKSYKRE LRRIRLYDTI NIESIFFVLS ELQRVPGEKY RPSVEVSKSS CRRIKSGIQR TYSPQYVYSL VEENEEEEEN
301: KEPRLVVQMD TESSMLYQKT CLDHFYDIPV QISGDVRIIF YEKLIGGRLF YACFNTAFVR NDLLQFSIRE LDKVGKKARS ITGSSFCLEL FFGPANGNCL
401: PTPPLHDDDF SDS

Best Arabidopsis Sequence Match ( AT5G39400.1 )
(BLAST)

001: MGLKLSRGPV KEKSPLEFTR VHILTYFTTN SYLRNLVSKK RRRLIIGGYD LDMSYISDKL LAMSFPAERM RAVYRNPLWQ VKSVLDMRHP DHYKVYNLCI
101: EESYDPDNFY GRVERFPFDD NHVPSLKMIQ LFCESVHSWL SLDPKNIAVV HCMAGKGRTG LMVSAYLVYG GMSAEEALEM YASRRTTNNN GVSIPSQRRY
201: VKYWSDLLSF SKKGPPEVKL PQEHSRELLR IRLYDTANVD SVFFVVSELQ EVPNEMYRPS VELARGCCRQ FKKGYCRSSS PRYYISHVNC DSEEDEEVTD
301: GEEPHLVVQM DTESSIIDEK TCLDFYFDKP VRVSGDIRIT FYQKMIGSRL FYTCFNTAFI TNGLLQFSIG ELDKVGGNGR SISGPDFSLE LLFGPACSKF
401: GKFLSRDDLS LS

Arabidopsis Description

PTEN1Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.