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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • plastid 3
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
plastid: 20363867
plastid: 22908117
msms PMID: 22908117 doi
C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID: 20363867 doi
C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400066563 Potato cytosol, plastid 96.93 97.72
VIT_03s0180g00020.t01 Wine grape cytosol 70.6 71.99
KRH35761 Soybean nucleus 70.76 70.42
KRG90993 Soybean cytosol 70.44 69.98
CDY46177 Canola cytosol 65.27 68.47
GSMUA_Achr10P... Banana cytosol 65.43 68.41
CDX95448 Canola cytosol 65.43 68.41
Bra038209.1-P Field mustard cytosol 65.11 68.31
CDY50153 Canola cytosol 64.94 68.02
CDY63391 Canola cytosol 64.94 67.91
Bra022420.1-P Field mustard cytosol 64.46 67.74
AT3G19420.1 Thale cress cytosol 66.72 67.59
Bra022421.1-P Field mustard cytosol 65.59 67.44
GSMUA_Achr7P21640_001 Banana cytosol 63.49 66.95
Solyc02g093000.2.1 Tomato cytosol 47.82 65.34
OQU88311 Sorghum cytosol 65.59 62.65
Os12t0407500-01 Rice plasma membrane 65.27 61.4
TraesCS5D01G117900.1 Wheat cytosol 63.97 60.64
HORVU5Hr1G031300.2 Barley cytosol 63.97 60.55
TraesCS5B01G115500.1 Wheat cytosol 63.97 60.55
TraesCS5A01G116100.1 Wheat cytosol 63.49 60.18
CDY22969 Canola cytosol, mitochondrion 13.09 58.7
GSMUA_Achr5P07740_001 Banana cytosol 54.77 57.95
Zm00001d007942_P002 Maize cytosol 64.14 55.37
CDY65163 Canola plastid 34.09 52.75
Os12t0407200-01 Rice cytosol, extracellular 9.37 51.79
Solyc03g013310.2.1 Tomato cytosol 15.67 23.49
Protein Annotations
MapMan:18.4.23.2.1Gene3D:2.60.40.1110Gene3D:3.90.190.10GO:GO:0003674GO:GO:0003824GO:GO:0004725
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829
GO:GO:0006464GO:GO:0006629GO:GO:0006950GO:GO:0006970GO:GO:0008150GO:GO:0008152
GO:GO:0008289GO:GO:0009628GO:GO:0009651GO:GO:0009987GO:GO:0016311GO:GO:0016787
GO:GO:0019538GO:GO:0035335GO:GO:0046856GO:GO:0052866GO:GO:0070300InterPro:IPR014020
InterPro:IPR029021InterPro:IPR029023UniProt:K4B2Z1ScanProsite:PS00383PFscan:PS51181PFscan:PS51182
PANTHER:PTHR12305PANTHER:PTHR12305:SF57InterPro:Prot-tyrosine_phosphatase-likeSMART:SM01326SUPFAM:SSF49562SUPFAM:SSF52799
EnsemblPlantsGene:Solyc01g107750.2EnsemblPlants:Solyc01g107750.2.1InterPro:Tensin_C2-domInterPro:Tensin_phosphataseInterPro:Tyr_Pase_ASUniParc:UPI0002767E6F
SEG:seg:::::
Description
Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A [Source:Projected from Arabidopsis thaliana (AT3G19420) UniProtKB/Swiss-Prot;Acc:Q9LT75]
Coordinates
chr1:-:95188959..95197318
Molecular Weight (calculated)
67719.8 Da
IEP (calculated)
5.526
GRAVY (calculated)
-0.527
Length
619 amino acids
Sequence
(BLAST)
001: MDSGSADVSN SQPVTTSSAA RSTAVESAPV QSTEEAPSKI STSGISSWAK NLKIPQPFTG SQDEQSSGNA PKSTFARLTG GLGMRLSPKS PTSPTDEHVD
101: GTSTSPTSLF GTFTKGLVDS SKNAVKAVQV KARHVVSQNK RRYQEGGFDL DLTYITENII AMGFPAGDMS SGLFGYVEGF YRNHMEEVIK FFETHHKDKY
201: KVYNLCAERL YDASLFEGKV ASFPFDDHNC PPIQLIISFC QSAYSWLKED IENVVVVHCK AGMARTGLMI SSLLLYLKFF PTAEESMDYY NQKRCVDGKG
301: LVLPSQIRYV KYFERILMYF NGENQPGRRC MLRGFRLHRC PYWIRPSITV SDHNGVLFSS KKHPRTKDLS PEDFWFNAPK KGVVVFALPG EPGLAELAGD
401: FKIHFHDRQG DFYCWLNTTM IENRKVLMTS DLDGFDKRKL PSPGFQVEVV LADYDAALPA RPQSETATKE SADSSSANPA PVSNPTSGSE PADGTNVNQQ
501: PGNNDKDDVF SDNESEEPGM SKARQSKAAS EVSAPADAKN PGSRNKDDSD KISSLTHKTE QVSLGDTSSV HSEPKKDASV GTASSVDVSN PVGGVSDFKV
601: MAADASVFSF GDEEDYESD
Best Arabidopsis Sequence Match ( AT3G19420.1 )
(BLAST)
001: MSSESPNLPA AAGTVPDNHP PPPPVVTAAE AGSDDSPKGV ASKLSAAGIS NWAKNLKVPQ PFASTQNDSG VENTEKSAFA KFTSGLGIRL SPKSPQTNDT
101: TTEGTSSATE SSFIGTITKG LVDTSKNAVK AVQVKARHAV SQNKRRYQEG GFDLDLTYIT ENIIAMGFPA GDMSSGFFGY VEGFYRNQME EVINFLETQH
201: KGKYKVYNLC SERLYDVSLF EGKVASFPFD DHNCPPIHLV TSFCQSAYSW LKEDIENVVV VHCKAGMART GLMICSLLLY LKFFPTAEEC MDFYNQKRCV
301: DGKGLVLPSQ IRYVKYFERI LTYFNGENQP GRRCMLRGFR LHRCPYWIRP SITISDHNGV LFTTKKHPRT KDLSPEDFWF SAPKKGVMVF ALPGEPGLTE
401: LAGDFKIQFH DRQGDFYCWL NTTMMENRVI LKTSELDGFD KRKLPSPGFM VEVVLADINA TIPTNPSSET ASKTPEETSA ANSSPVDGSA SVPGPDKETE
501: NPDKDDVFSD NEGDSTGPTK TTSSASSQTP EAKKSADETA VLTKATEKVS ISGNKGSSQP VQGVTVSKGE ATEKPSGAGV NASSSSESEF KVMAADASVF
601: SFGDEDDFES D
Arabidopsis Description
PTEN2APTEN2A [Source:UniProtKB/TrEMBL;Acc:A0A178V9M6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.