CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65163	Canola	plastid	47.1	16.25
AT3G19420.1	Thale cress	cytosol	68.12	15.38
CDX95448	Canola	cytosol	65.94	15.37
CDY46177	Canola	cytosol	65.22	15.25
CDY50153	Canola	cytosol	65.22	15.23
CDY63391	Canola	cytosol	65.22	15.2
CDY24016	Canola	extracellular	10.87	14.56
GSMUA_Achr7P21640_001	Banana	cytosol	57.25	13.46
Solyc01g107750.2.1	Tomato	plastid	58.7	13.09
PGSC0003DMT400066563	Potato	cytosol, plastid	57.97	13.03
KRH35761	Soybean	nucleus	58.7	13.02
VIT_03s0180g00020.t01	Wine grape	cytosol	57.25	13.01
GSMUA_Achr10P...	Banana	cytosol	55.8	13.01
KRG90993	Soybean	cytosol	58.7	13.0
HORVU5Hr1G031300.2	Barley	cytosol	60.87	12.84
TraesCS5D01G117900.1	Wheat	cytosol	60.14	12.71
TraesCS5A01G116100.1	Wheat	cytosol	60.14	12.71
TraesCS5B01G115500.1	Wheat	cytosol	60.14	12.69
OQU88311	Sorghum	cytosol	59.42	12.65
GSMUA_Achr5P07740_001	Banana	cytosol	53.62	12.65
Os12t0407500-01	Rice	plasma membrane	59.42	12.46
CDY02094	Canola	cytosol	49.28	12.08
CDY23021	Canola	cytosol	49.28	11.7
Zm00001d007942_P002	Maize	cytosol	59.42	11.44
CDY70932	Canola	extracellular, golgi	18.12	11.42
CDX74467	Canola	cytosol, mitochondrion, nucleus, plastid	24.64	8.23
CDY37003	Canola	nucleus	23.91	7.93
CDX67428	Canola	nucleus	23.91	7.93
CDY37863	Canola	mitochondrion	23.19	6.56
Os12t0407200-01	Rice	cytosol, extracellular	4.35	5.36

Protein Annotations

EnsemblPlants:CDY22969	EnsemblPlantsGene:GSBRNA2T00021379001	Gene3D:3.90.190.10	InterPro:IPR029021	InterPro:Prot-tyrosine_phosphatase-like	PANTHER:PTHR12305
PANTHER:PTHR12305:SF57	ProteinID:CDY22969	ProteinID:CDY22969.1	SUPFAM:SSF52799	UniParc:UPI0004EE3F33	UniProt:A0A078GC98
MapMan:35.1	:	:	:	:	:

Description

BnaC03g41000DBnaC03g41000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GC98]

Coordinates

chrLK032138:+:289915..291249

Molecular Weight (calculated)

15904.4 Da

IEP (calculated)

10.412

GRAVY (calculated)

-0.410

Length

138 amino acids

Sequence
(BLAST)

001: MGQKLSKYLP FALGIRLSPH RPDETTEGTS SQPCFIGTIT KGLVDSSKNA VKAVQVKARH AVSQNKRRYQ NIIAMGFPAG LGFYRNQMEQ VITFLETRHK
101: GKYKVYNLCS ERLYDVYRYL RERWPVSYLM TIIAHQSI

Best Arabidopsis Sequence Match ( AT3G19420.1 )
(BLAST)

001: MSSESPNLPA AAGTVPDNHP PPPPVVTAAE AGSDDSPKGV ASKLSAAGIS NWAKNLKVPQ PFASTQNDSG VENTEKSAFA KFTSGLGIRL SPKSPQTNDT
101: TTEGTSSATE SSFIGTITKG LVDTSKNAVK AVQVKARHAV SQNKRRYQEG GFDLDLTYIT ENIIAMGFPA GDMSSGFFGY VEGFYRNQME EVINFLETQH
201: KGKYKVYNLC SERLYDVSLF EGKVASFPFD DHNCPPIHLV TSFCQSAYSW LKEDIENVVV VHCKAGMART GLMICSLLLY LKFFPTAEEC MDFYNQKRCV
301: DGKGLVLPSQ IRYVKYFERI LTYFNGENQP GRRCMLRGFR LHRCPYWIRP SITISDHNGV LFTTKKHPRT KDLSPEDFWF SAPKKGVMVF ALPGEPGLTE
401: LAGDFKIQFH DRQGDFYCWL NTTMMENRVI LKTSELDGFD KRKLPSPGFM VEVVLADINA TIPTNPSSET ASKTPEETSA ANSSPVDGSA SVPGPDKETE
501: NPDKDDVFSD NEGDSTGPTK TTSSASSQTP EAKKSADETA VLTKATEKVS ISGNKGSSQP VQGVTVSKGE ATEKPSGAGV NASSSSESEF KVMAADASVF
601: SFGDEDDFES D

Arabidopsis Description

PTEN2APTEN2A [Source:UniProtKB/TrEMBL;Acc:A0A178V9M6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.