CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER87703

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50110.1	EER87703	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0407500-01	Rice	plasma membrane	85.49	84.19
Zm00001d007942_P002	Maize	cytosol	92.28	83.4
HORVU5Hr1G031300.2	Barley	cytosol	83.18	82.42
TraesCS5D01G117900.1	Wheat	cytosol	83.02	82.39
TraesCS5B01G115500.1	Wheat	cytosol	82.72	81.96
TraesCS5A01G116100.1	Wheat	cytosol	82.1	81.47
GSMUA_Achr10P...	Banana	cytosol	65.59	71.79
VIT_03s0180g00020.t01	Wine grape	cytosol	65.12	69.52
GSMUA_Achr7P21640_001	Banana	cytosol	62.19	68.65
VIT_07s0031g00020.t01	Wine grape	cytosol	50.46	67.56
PGSC0003DMT400066563	Potato	cytosol, plastid	62.5	65.96
Solyc01g107750.2.1	Tomato	plastid	62.65	65.59
Solyc02g093000.2.1	Tomato	cytosol	45.68	65.34
CDX95448	Canola	cytosol	59.57	65.2
Bra038209.1-P	Field mustard	cytosol	59.1	64.92
CDY46177	Canola	cytosol	58.8	64.58
CDY50153	Canola	cytosol	58.8	64.47
KRH35761	Soybean	nucleus	61.73	64.31
CDY63391	Canola	cytosol	58.64	64.19
Bra022420.1-P	Field mustard	cytosol	58.33	64.18
KRG90993	Soybean	cytosol	61.57	64.04
Bra022421.1-P	Field mustard	cytosol	59.26	63.79
AT3G19420.1	Thale cress	cytosol	59.41	63.01
PGSC0003DMT400064308	Potato	cytosol, plastid	56.48	60.8
CDY22969	Canola	cytosol, mitochondrion	12.65	59.42
KRH77047	Soybean	nucleus, plastid	54.63	58.42
CDY23021	Canola	cytosol	51.54	57.49
KRH28426	Soybean	cytosol, plastid	53.7	57.33
Bra012908.1-P	Field mustard	cytosol	48.92	56.71
CDY02094	Canola	cytosol	48.3	55.59
AT3G50110.1	Thale cress	cytosol	53.09	54.43
CDY65163	Canola	plastid	30.56	49.5

Protein Annotations

MapMan:18.4.23.2.1	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	UniProt:A0A1W0W1T3	GO:GO:0003674	GO:GO:0003824
GO:GO:0004725	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	GO:GO:0019538	GO:GO:0035335	InterPro:IPR014020	InterPro:IPR029021	InterPro:IPR029023
EnsemblPlants:OQU88311	ProteinID:OQU88311	ProteinID:OQU88311.1	ScanProsite:PS00383	PFscan:PS51181	PFscan:PS51182
PANTHER:PTHR12305	PANTHER:PTHR12305:SF57	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM01326	EnsemblPlantsGene:SORBI_3002G008800	SUPFAM:SSF49562
SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	InterPro:Tyr_Pase_AS	UniParc:UPI0009DC88DB	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:798689..806545

Molecular Weight (calculated)

70384.3 Da

IEP (calculated)

5.873

GRAVY (calculated)

-0.510

Length

648 amino acids

Sequence
(BLAST)

001: MEEQQVKPLD LPPTSLDNQD SAATPVTSAD PVRPAATDSP SKVAGAAPAA VSSPTAAPAE DAAGREAPAS VFSASGLSSW AKNLKIPQPS SGQESPTGKN
101: TFARLTSGLG LRMSPKAPQQ DEGAEGSTSP TTGQPGVFGS LTKGIVDSSK NAVKAVQVKA RHMVSQNKRR YQEGGFDLDM TYITENIIAM GFPAGDLSSG
201: LFGYFEGFYR NHMEEVIRFF EMHHKGKYKV YNLCSERLYD ASLFEGKVAC FPFDDHNCPP IQLVISFCHS AYSWLKEDIE NVVVVHCKAG KARTGLMISS
301: LLLFLKFFPT AEESIEYYNQ KRCVDGKGLI LPSQIRYVKY FERILTYFNG ENQPPRRCML RGFRLHRCPY WIRPSITVSN HNGVLFSTKK HPRTKELMPE
401: DFWFSAPKKG IMVFALPGEP GLAEVAGDFK IQFHDRQGDF YCWLNTTMME NRVTLNPTDL DDFDKRKLPS PGFQVEVVLV DYDGSQPPKP KPATGPADNK
501: SDADSSASTV AKENNAAPAE SNKGTGSNDK DEVFSDSDGE DGSSKGRKEK IASGGQNSVN AAKPSETSNV QKEVSAAASR LDKVAITSEQ GTTKAPDASL
601: KTEVSSKTSS LTTAPPTAAD NSSMSEFKAI AADASVFSFG DEEDYESE

Best Arabidopsis Sequence Match ( AT3G19420.1 )
(BLAST)

001: MSSESPNLPA AAGTVPDNHP PPPPVVTAAE AGSDDSPKGV ASKLSAAGIS NWAKNLKVPQ PFASTQNDSG VENTEKSAFA KFTSGLGIRL SPKSPQTNDT
101: TTEGTSSATE SSFIGTITKG LVDTSKNAVK AVQVKARHAV SQNKRRYQEG GFDLDLTYIT ENIIAMGFPA GDMSSGFFGY VEGFYRNQME EVINFLETQH
201: KGKYKVYNLC SERLYDVSLF EGKVASFPFD DHNCPPIHLV TSFCQSAYSW LKEDIENVVV VHCKAGMART GLMICSLLLY LKFFPTAEEC MDFYNQKRCV
301: DGKGLVLPSQ IRYVKYFERI LTYFNGENQP GRRCMLRGFR LHRCPYWIRP SITISDHNGV LFTTKKHPRT KDLSPEDFWF SAPKKGVMVF ALPGEPGLTE
401: LAGDFKIQFH DRQGDFYCWL NTTMMENRVI LKTSELDGFD KRKLPSPGFM VEVVLADINA TIPTNPSSET ASKTPEETSA ANSSPVDGSA SVPGPDKETE
501: NPDKDDVFSD NEGDSTGPTK TTSSASSQTP EAKKSADETA VLTKATEKVS ISGNKGSSQP VQGVTVSKGE ATEKPSGAGV NASSSSESEF KVMAADASVF
601: SFGDEDDFES D

Arabidopsis Description

PTEN2APTEN2A [Source:UniProtKB/TrEMBL;Acc:A0A178V9M6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.