Factsheet for VIT_07s0031g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_16s0050g01050.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50110.1	VIT_16s0050g01050.t01	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g093000.2.1	Tomato	cytosol	58.88	62.91
VIT_03s0180g00020.t01	Wine grape	cytosol	73.55	58.65
GSMUA_Achr10P...	Banana	cytosol	70.45	57.6
GSMUA_Achr7P21640_001	Banana	cytosol	69.42	57.24
PGSC0003DMT400064308	Potato	cytosol, plastid	66.74	53.65
KRH77047	Soybean	nucleus, plastid	66.32	52.97
KRH28426	Soybean	cytosol, plastid	65.7	52.39
Bra012908.1-P	Field mustard	cytosol	59.09	51.16
CDY23021	Canola	cytosol	60.95	50.77
OQU88311	Sorghum	cytosol	67.56	50.46
CDY02094	Canola	cytosol	58.68	50.44
Os12t0407500-01	Rice	plasma membrane	67.77	49.85
TraesCS5B01G115500.1	Wheat	cytosol	67.15	49.69
TraesCS5D01G117900.1	Wheat	cytosol	66.94	49.62
TraesCS5A01G116100.1	Wheat	cytosol	66.53	49.31
GSMUA_Achr5P07740_001	Banana	cytosol	59.5	49.23
HORVU5Hr1G031300.2	Barley	cytosol	66.32	49.08
AT3G50110.1	Thale cress	cytosol	62.19	47.63
Os12t0407200-01	Rice	cytosol, extracellular	10.95	47.32
Zm00001d007942_P002	Maize	cytosol	66.74	45.05
VIT_14s0108g01410.t01	Wine grape	cytosol	15.7	35.51
VIT_01s0137g00100.t01	Wine grape	cytosol	7.23	17.07
VIT_14s0108g01400.t01	Wine grape	cytosol	2.89	8.43

Protein Annotations

EntrezGene:100259289	wikigene:100259289	MapMan:18.4.23.2.1	Gene3D:3.90.190.10	ProteinID:CCB47038	ProteinID:CCB47038.1
UniProt:F6H4F6	EMBL:FN595233	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006950
GO:GO:0006970	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	GO:GO:0019538	GO:GO:0035335	GO:GO:0052866	InterPro:IPR014020
InterPro:IPR029021	InterPro:IPR029023	EntrezGene:LOC100259289	wikigene:LOC100259289	ScanProsite:PS00383	PFscan:PS51181
PFscan:PS51182	PANTHER:PTHR12305	PANTHER:PTHR12305:SF57	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM01326	SUPFAM:SSF52799
InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	InterPro:Tyr_Pase_AS	UniParc:UPI00021083E8	ArrayExpress:VIT_07s0031g00020	EnsemblPlantsGene:VIT_07s0031g00020
EnsemblPlants:VIT_07s0031g00020.t01	unigene:Vvi.21301	RefSeq:XP_002278436	RefSeq:XP_002278436.1	SEG:seg	:

Description

No Description!

Coordinates

chr7:-:16284320..16290606

Molecular Weight (calculated)

53975.6 Da

IEP (calculated)

6.916

GRAVY (calculated)

-0.480

Length

484 amino acids

Sequence
(BLAST)

001: MPAESVVSTS TTTQPGVLES FTKGLVDSSK SAVKAVQVKA RHIVSQNKRR YQEGEFDLDM TYITENIIAM GFPAGDMSSG FLGFIEGFYR NHMEEVIKFF
101: ETHHKGKYKV YNLCSERLYD ASLFEGKVAS FPFDDHNCPP IQLITSFCQS AYSWLKQDIE NVVVVHCKAG MARTGLMLSS LLLFLKFFPT AEESINYYNQ
201: KRCLDGKGLV LPSQIRYVKY FERILTHFNG QNPPGRRCML RGFRLHRCPS WFRPSITVSD HNGILFSTRK HPKTKDLMPE DFWISAAKKG IVVFALPREP
301: GLAELAGDFK FHFHDSEGDF YCWLNTTMTE NRKILSTYDL DGFEKRKLPS PGFQVEVVMI DYDGTIQTRF KSDSSRNGSD GNSGYVPAPS GGVAATSNQS
401: KVSESQDNDD VFSDSEGEET ESSTRKQAQT TSGTGHGAPG PKSGSTVEQI AGIKHGTEHL SLVSEQPSQI NPSKEPKSDG ALQE

Best Arabidopsis Sequence Match ( AT3G19420.1 )
(BLAST)

001: MSSESPNLPA AAGTVPDNHP PPPPVVTAAE AGSDDSPKGV ASKLSAAGIS NWAKNLKVPQ PFASTQNDSG VENTEKSAFA KFTSGLGIRL SPKSPQTNDT
101: TTEGTSSATE SSFIGTITKG LVDTSKNAVK AVQVKARHAV SQNKRRYQEG GFDLDLTYIT ENIIAMGFPA GDMSSGFFGY VEGFYRNQME EVINFLETQH
201: KGKYKVYNLC SERLYDVSLF EGKVASFPFD DHNCPPIHLV TSFCQSAYSW LKEDIENVVV VHCKAGMART GLMICSLLLY LKFFPTAEEC MDFYNQKRCV
301: DGKGLVLPSQ IRYVKYFERI LTYFNGENQP GRRCMLRGFR LHRCPYWIRP SITISDHNGV LFTTKKHPRT KDLSPEDFWF SAPKKGVMVF ALPGEPGLTE
401: LAGDFKIQFH DRQGDFYCWL NTTMMENRVI LKTSELDGFD KRKLPSPGFM VEVVLADINA TIPTNPSSET ASKTPEETSA ANSSPVDGSA SVPGPDKETE
501: NPDKDDVFSD NEGDSTGPTK TTSSASSQTP EAKKSADETA VLTKATEKVS ISGNKGSSQP VQGVTVSKGE ATEKPSGAGV NASSSSESEF KVMAADASVF
601: SFGDEDDFES D

Arabidopsis Description

PTEN2APTEN2A [Source:UniProtKB/TrEMBL;Acc:A0A178V9M6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.