Factsheet for GSMUA_Achr5P07740_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50110.1	GSMUA_AchrUn_...	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0031g00020.t01	Wine grape	cytosol	49.23	59.5
GSMUA_Achr10P...	Banana	cytosol	59.83	59.12
Solyc02g093000.2.1	Tomato	cytosol	44.96	58.06
GSMUA_Achr7P21640_001	Banana	cytosol	57.09	56.9
VIT_03s0180g00020.t01	Wine grape	cytosol	57.44	55.35
PGSC0003DMT400066563	Potato	cytosol, plastid	57.78	55.05
Solyc01g107750.2.1	Tomato	plastid	57.95	54.77
CDX95448	Canola	cytosol	54.87	54.22
CDY50153	Canola	cytosol	54.7	54.15
Bra038209.1-P	Field mustard	cytosol	54.53	54.07
CDY22969	Canola	cytosol, mitochondrion	12.65	53.62
Bra022420.1-P	Field mustard	cytosol	53.5	53.14
CDY46177	Canola	cytosol	53.5	53.05
CDY63391	Canola	cytosol	53.68	53.04
KRH35761	Soybean	nucleus	56.24	52.89
AT3G19420.1	Thale cress	cytosol	55.21	52.86
Bra022421.1-P	Field mustard	cytosol	54.19	52.66
KRG90993	Soybean	cytosol	56.07	52.65
KRH28426	Soybean	cytosol, plastid	54.19	52.22
PGSC0003DMT400064308	Potato	cytosol, plastid	53.5	51.99
KRH77047	Soybean	nucleus, plastid	53.85	51.98
CDY23021	Canola	cytosol	50.09	50.43
Bra012908.1-P	Field mustard	cytosol	47.52	49.73
CDY02094	Canola	cytosol	47.69	49.56
AT3G50110.1	Thale cress	cytosol	51.97	48.1
CDY65163	Canola	plastid	29.23	42.75

Protein Annotations

MapMan:18.4.23.2.1	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	ncoils:Coil	EnsemblPlantsGene:GSMUA_Achr5G07740_001	EnsemblPlants:GSMUA_Achr5P07740_001
EnsemblPlants:GSMUA_Achr5T07740_001	InterPro:IPR014020	InterPro:IPR029021	InterPro:IPR029023	UniProt:M0SWK3	PFAM:PF10409
PFscan:PS51181	PFscan:PS51182	PANTHER:PTHR12305	PANTHER:PTHR12305:SF57	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM01326
SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI0002948B4E	SEG:seg

Description

PTEN, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G07740_001]

Coordinates

chr5:-:5550289..5556713

Molecular Weight (calculated)

64748.0 Da

IEP (calculated)

5.317

GRAVY (calculated)

-0.493

Length

585 amino acids

Sequence
(BLAST)

001: MDLQDSKKVD SSSSTDTCNT ASTKQDTTLR EIPSILSTGI SSWAQSLRNL QQSHQEDSQP GNAGKLTLQR LTSGFGSLLY PNLSSKDENV EHDPTTLQSG
101: VWGSLTKGLV DSSKTAMKTV QGKARQIVSQ NKKRYQDGEF DLDLTYITEK IIAMGFPSGY ISSGILGLFE GLYRNHMEEV IKFLETQHKG KYKVYNLCSE
201: RLYDASLFEG KVACFPIDEY NCPPIQLIAS FCESTKSWLQ QDVENVVVVH AKAGIERTGL MISSLLLYLG FFATADESID HFNKERCIDA KGLIIPSQIR
301: YVRYFGCILT YFNGEVQPGR RCMLRGFRLY NCPYWIRPSI TVSKHNGVLF STKKHPKTKD LMPEDFWFKS KQKGIMIFAI PGEPGLTELA GDFKVHFHDR
401: QGDFYCWLNT SMIDNKVTLS ASELDGFDKR KIPSPGFQVE IVMVDYDHSR SQNPMSTNVN KDSDGRLATG KPKGDSSSIS STPNKNKDNK DDVFSDSDAE
501: ETRSPRGENA NSPNDKTAGI EQASLEDGAA AAMVPKKAPT EGGSSGLMSE EAVVANSAAV SEFKAIAADA SVFSFGDDED EYESE

Best Arabidopsis Sequence Match ( AT3G19420.1 )
(BLAST)

001: MSSESPNLPA AAGTVPDNHP PPPPVVTAAE AGSDDSPKGV ASKLSAAGIS NWAKNLKVPQ PFASTQNDSG VENTEKSAFA KFTSGLGIRL SPKSPQTNDT
101: TTEGTSSATE SSFIGTITKG LVDTSKNAVK AVQVKARHAV SQNKRRYQEG GFDLDLTYIT ENIIAMGFPA GDMSSGFFGY VEGFYRNQME EVINFLETQH
201: KGKYKVYNLC SERLYDVSLF EGKVASFPFD DHNCPPIHLV TSFCQSAYSW LKEDIENVVV VHCKAGMART GLMICSLLLY LKFFPTAEEC MDFYNQKRCV
301: DGKGLVLPSQ IRYVKYFERI LTYFNGENQP GRRCMLRGFR LHRCPYWIRP SITISDHNGV LFTTKKHPRT KDLSPEDFWF SAPKKGVMVF ALPGEPGLTE
401: LAGDFKIQFH DRQGDFYCWL NTTMMENRVI LKTSELDGFD KRKLPSPGFM VEVVLADINA TIPTNPSSET ASKTPEETSA ANSSPVDGSA SVPGPDKETE
501: NPDKDDVFSD NEGDSTGPTK TTSSASSQTP EAKKSADETA VLTKATEKVS ISGNKGSSQP VQGVTVSKGE ATEKPSGAGV NASSSSESEF KVMAADASVF
601: SFGDEDDFES D

Arabidopsis Description

PTEN2APTEN2A [Source:UniProtKB/TrEMBL;Acc:A0A178V9M6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.