Factsheet for TraesCS5B01G115500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS7A01G019000.1
TraesCS7D01G016100.1
TraesCSU01G065800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50110.1	TraesCS7A01G019000.1	AT4G25660.1	21798944
AT3G50110.1	TraesCS7D01G016100.1	AT4G25660.1	21798944
AT3G50110.1	TraesCSU01G065800.1	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G117900.1	Wheat	cytosol	98.62	98.77
TraesCS5A01G116100.1	Wheat	cytosol	97.55	97.7
HORVU5Hr1G031300.2	Barley	cytosol	96.64	96.64
Os12t0407500-01	Rice	plasma membrane	84.4	83.89
OQU88311	Sorghum	cytosol	81.96	82.72
Zm00001d007942_P002	Maize	cytosol	80.58	73.5
GSMUA_Achr10P...	Banana	cytosol	64.98	71.79
GSMUA_Achr7P21640_001	Banana	cytosol	61.93	68.99
VIT_07s0031g00020.t01	Wine grape	cytosol	49.69	67.15
VIT_03s0180g00020.t01	Wine grape	cytosol	62.23	67.05
Solyc02g093000.2.1	Tomato	cytosol	44.95	64.9
CDX95448	Canola	cytosol	58.72	64.86
CDY46177	Canola	cytosol	58.26	64.58
Bra038209.1-P	Field mustard	cytosol	58.1	64.41
CDY50153	Canola	cytosol	58.1	64.3
PGSC0003DMT400066563	Potato	cytosol, plastid	60.24	64.17
CDY63391	Canola	cytosol	57.95	64.02
Bra022420.1-P	Field mustard	cytosol	57.65	64.01
Solyc01g107750.2.1	Tomato	plastid	60.55	63.97
Bra022421.1-P	Field mustard	cytosol	58.87	63.95
AT3G19420.1	Thale cress	cytosol	58.87	63.01
KRH35761	Soybean	nucleus	59.79	62.86
KRG90993	Soybean	cytosol	59.63	62.6
PGSC0003DMT400064308	Potato	cytosol, plastid	55.5	60.3
CDY22969	Canola	cytosol, mitochondrion	12.69	60.14
KRH77047	Soybean	nucleus, plastid	53.67	57.92
KRH28426	Soybean	cytosol, plastid	53.21	57.33
CDY23021	Canola	cytosol	50.92	57.31
Bra012908.1-P	Field mustard	cytosol	48.32	56.53
CDY02094	Canola	cytosol	48.32	56.13
AT3G50110.1	Thale cress	cytosol	53.06	54.91
CDY65163	Canola	plastid	29.66	48.5

Protein Annotations

MapMan:18.4.23.2.1	Gene3D:3.90.190.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0019538
InterPro:IPR014020	InterPro:IPR029021	InterPro:IPR029023	ScanProsite:PS00383	PFscan:PS51181	PFscan:PS51182
PANTHER:PTHR12305	PANTHER:PTHR12305:SF57	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM01326	SUPFAM:SSF49562	SUPFAM:SSF52799
InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	EnsemblPlantsGene:TraesCS5B01G115500	EnsemblPlants:TraesCS5B01G115500.1	InterPro:Tyr_Pase_AS	SEG:seg

Description

No Description!

Coordinates

chr5B:-:192862026..192876415

Molecular Weight (calculated)

71235.1 Da

IEP (calculated)

5.461

GRAVY (calculated)

-0.547

Length

654 amino acids

Sequence
(BLAST)

001: MEQQQVKPSL PPSDAPMDNQ DSSPLPAVTT ADPVPRALSN DSATQAASPN PVAPSSPSAP TSATTQDAAG RESPSSMFST SGLSSWAKNL KIPQPSSGQE
101: SPPGKNTVSR LASGLGLRLS PKYPQQDESA EGSTTPTTAQ AGVFGSLTRG IVDSSKNAVK AVQVKARHMV SQNKRRYQEG GFDLDMTYIT ENIIAMGFPA
201: GDLSSGIFGY FEGFYRNHME EVIRFFEMHH KGKYKVYNLC SERLYDASLF EGKVACFPFD DHNCPPIQLV ISFCQSAYSW LKEDIENVVV VHCKAGKART
301: GLMISSLLVY LKFFPTAEES IEYYNQKRCV DGKGLILPSQ IRYVKYFERI LTYFNGENQP PRRCMLRGFR LHRCPYWIRP SITVSNHNGV LFSTKKHPRT
401: KELMPEDFWF SAPKKGIMVF ALPGEPGLAE VAGDFKIQFH DRQGDFYCWL NTTMMENRVT LNPTDFDDFD KRKLPSPGFQ VEIVLVDYSG SQPPKQKPAD
501: GSADKKSDAD SSTSSSAKDS NAAPVESKKE TGSDDKDDVF SDNEAEDGSS KGRKEEVSSS GQGGANGAKA SETSVAQQEP SAVASGIEKI TISGDQGIAR
601: APDVISLKTE ASSKSGSTKA QPPALESSSL SEFKAIAADA SVFSFGDEDD YESE

Best Arabidopsis Sequence Match ( AT3G19420.1 )
(BLAST)

001: MSSESPNLPA AAGTVPDNHP PPPPVVTAAE AGSDDSPKGV ASKLSAAGIS NWAKNLKVPQ PFASTQNDSG VENTEKSAFA KFTSGLGIRL SPKSPQTNDT
101: TTEGTSSATE SSFIGTITKG LVDTSKNAVK AVQVKARHAV SQNKRRYQEG GFDLDLTYIT ENIIAMGFPA GDMSSGFFGY VEGFYRNQME EVINFLETQH
201: KGKYKVYNLC SERLYDVSLF EGKVASFPFD DHNCPPIHLV TSFCQSAYSW LKEDIENVVV VHCKAGMART GLMICSLLLY LKFFPTAEEC MDFYNQKRCV
301: DGKGLVLPSQ IRYVKYFERI LTYFNGENQP GRRCMLRGFR LHRCPYWIRP SITISDHNGV LFTTKKHPRT KDLSPEDFWF SAPKKGVMVF ALPGEPGLTE
401: LAGDFKIQFH DRQGDFYCWL NTTMMENRVI LKTSELDGFD KRKLPSPGFM VEVVLADINA TIPTNPSSET ASKTPEETSA ANSSPVDGSA SVPGPDKETE
501: NPDKDDVFSD NEGDSTGPTK TTSSASSQTP EAKKSADETA VLTKATEKVS ISGNKGSSQP VQGVTVSKGE ATEKPSGAGV NASSSSESEF KVMAADASVF
601: SFGDEDDFES D

Arabidopsis Description

PTEN2APTEN2A [Source:UniProtKB/TrEMBL;Acc:A0A178V9M6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.