CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026263.1-P	Field mustard	nucleus	86.41	54.27
CDY70932	Canola	extracellular, golgi	87.38	41.1
VIT_14s0108g01410.t01	Wine grape	cytosol	64.08	30.84
CDX67428	Canola	nucleus	84.47	20.91
CDY37003	Canola	nucleus	84.47	20.91
CDX74467	Canola	cytosol, mitochondrion, nucleus, plastid	79.61	19.85
KRH44965	Soybean	cytosol	71.84	17.75
CDY37863	Canola	mitochondrion	77.67	16.39
Solyc03g013310.2.1	Tomato	cytosol	64.08	15.98
PGSC0003DMT400059435	Potato	cytosol	64.08	15.94
CDY22969	Canola	cytosol, mitochondrion	14.56	10.87
CDY65163	Canola	plastid	38.84	10.0
CDY46177	Canola	cytosol	41.75	7.29
CDY02094	Canola	cytosol	39.81	7.28
CDY63391	Canola	cytosol	41.75	7.26
CDY50153	Canola	cytosol	40.78	7.11
CDX95448	Canola	cytosol	40.78	7.09
CDY23021	Canola	cytosol	39.81	7.06

Protein Annotations

MapMan:18.4.23.2.1	Gene3D:3.90.190.10	GO:A0A078GF85	UniProt:A0A078GF85	EnsemblPlants:CDY24016	ProteinID:CDY24016
ProteinID:CDY24016.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0019538	GO:GO:0035335
EnsemblPlantsGene:GSBRNA2T00024536001	InterPro:IPR029021	InterPro:IPR029023	ScanProsite:PS00383	PFscan:PS51181	PANTHER:PTHR12305
PANTHER:PTHR12305:SF80	InterPro:Prot-tyrosine_phosphatase-like	SUPFAM:SSF52799	InterPro:Tensin_phosphatase	InterPro:Tyr_Pase_AS	UniParc:UPI0004EEB1D2

Description

BnaC03g16750DBnaC03g16750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GF85]

Coordinates

chrLK032152:-:485159..485609

Molecular Weight (calculated)

11988.8 Da

IEP (calculated)

6.778

GRAVY (calculated)

0.011

Length

103 amino acids

Sequence
(BLAST)

001: MINFTPAILQ VEMMMILQVK SVLDMRHHNH YKVYNLCIEE CYDPENFYGR VERFPFDDNH VPTLKMIQLF CESVHSWLSL DPKNIAVVHC MAGKGRTGLM
101: VSA

Best Arabidopsis Sequence Match ( AT5G39400.1 )
(BLAST)

001: MGLKLSRGPV KEKSPLEFTR VHILTYFTTN SYLRNLVSKK RRRLIIGGYD LDMSYISDKL LAMSFPAERM RAVYRNPLWQ VKSVLDMRHP DHYKVYNLCI
101: EESYDPDNFY GRVERFPFDD NHVPSLKMIQ LFCESVHSWL SLDPKNIAVV HCMAGKGRTG LMVSAYLVYG GMSAEEALEM YASRRTTNNN GVSIPSQRRY
201: VKYWSDLLSF SKKGPPEVKL PQEHSRELLR IRLYDTANVD SVFFVVSELQ EVPNEMYRPS VELARGCCRQ FKKGYCRSSS PRYYISHVNC DSEEDEEVTD
301: GEEPHLVVQM DTESSIIDEK TCLDFYFDKP VRVSGDIRIT FYQKMIGSRL FYTCFNTAFI TNGLLQFSIG ELDKVGGNGR SISGPDFSLE LLFGPACSKF
401: GKFLSRDDLS LS

Arabidopsis Description

PTEN1Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.